debian/changelog

@@ -2,4 +2,4 @@ porechop (0.2.3+dfsg-1) UNRELEASED; urgency=medium
 
   * Initial release (Closes: #890112)
 
- -- Cédric Lood <cedric.lood@kuleuven.be>  Sun, 11 Feb 2018 13:59:00 +0200
+ -- Andreas Tille <tille@debian.org>  Sun, 26 Aug 2018 19:57:42 +0200

debian/compat

-10
+11

debian/control

 Source: porechop
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
-Uploaders: Cédric Lood <cedric.lood@kuleuven.be>
+Uploaders: Cédric Lood <cedric.lood@kuleuven.be>,
+           Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 10),
+Build-Depends: debhelper (>= 11~),
+               dh-python,
                python3-all-dev,
                libseqan2-dev
-Standards-Version: 4.1.3
-Vcs-Browser: https://salsa.debian.org/med-team/bandage.git
-Vcs-Git: https://salsa.debian.org/med-team/bandage.git
+Standards-Version: 4.2.0
+Vcs-Browser: https://salsa.debian.org/med-team/porechop
+Vcs-Git: https://salsa.debian.org/med-team/porechop.git
 Homepage: https://rrwick.github.io/Porechop
 
 Package: porechop

debian/copyright

@@ -16,12 +16,13 @@ License: GPL-3+
  This program is free software: you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
  the Free Software Foundation, either version 3 of the License, or (at
- your option) any later version.  .  This package is distributed in
+ your option) any later version.
+ .
+ This package is distributed in
  the hope that it will be useful, but WITHOUT ANY WARRANTY; without
  even the implied warranty of MERCHANTABILITY or FITNESS FOR A
  PARTICULAR PURPOSE.  See the GNU General Public License for more
- details.  .  You should have received a copy of the GNU General
- Public License along with this program. If not, see
- <http://www.gnu.org/licenses/>.  .  On Debian systems, the complete
- text of the GNU General Public License version 3 can be found in
- "/usr/share/common-licenses/GPL-3".
+ details.
+ .
+ On Debian systems, the complete text of the GNU General Public
+ License version 3 can be found in "/usr/share/common-licenses/GPL-3".

debian/install

-porechop/*.py	usr/lib/porechop
-porechop/*.so	usr/lib/porechop
+porechop/*.py		usr/share/porechop/porechop
+porechop-runner.py	usr/share/porechop

debian/links

-usr/lib/porechop/porechop.py	usr/bin/porechop
+usr/share/porechop/porechop-runner.py	usr/bin/porechop

debian/patches/add_python_interpreter_line.patch

+Author: Andreas Tille <tille@debian.org>
+Last-Update: Sun, 26 Aug 2018 19:57:42 +0200
+Description: Add interpreter line
+
+--- a/porechop/porechop.py
++++ b/porechop/porechop.py
+@@ -1,3 +1,4 @@
++#!/usr/bin/python3
+ """
+ Copyright 2017 Ryan Wick (rrwick@gmail.com)
+ https://github.com/rrwick/Porechop

debian/patches/series

+add_python_interpreter_line.patch

debian/rules

@@ -8,3 +8,11 @@ include /usr/share/dpkg/default.mk
 
 %:
 	dh $@ --with python3
+
+override_dh_install:
+	dh_install
+	mkdir -p debian/$(DEB_SOURCE)/usr/lib/$(DEB_HOST_MULTIARCH)/$(DEB_SOURCE)
+	cp -a porechop/cpp_functions.so debian/$(DEB_SOURCE)/usr/lib/$(DEB_HOST_MULTIARCH)/$(DEB_SOURCE)
+#	for so in `find . -name *.so` ; do \
+#	    cp $${so} debian/$(DEB_SOURCE)/usr/lib/$(DEB_HOST_MULTIARCH)/$(DEB_SOURCE)/`echo $${so} | sed 's/.cpython-[0-9]\+m-$(DEB_HOST_MULTIARCH)//'` ; \
+#	done