Commit 26d7d5fe authored by Liubov Chuprikova's avatar Liubov Chuprikova
Browse files

Skip one more test, missed earlier

parent 51b3d817

debian/rules

+13 −3
Original line number Diff line number Diff line
@@ -8,9 +8,11 @@ sampledir:=$(CURDIR)/debian/$(DEB_SOURCE)-examples/usr/share/doc/$(DEB_SOURCE)/e 


BUILDARCH:=$(shell dpkg-architecture -q DEB_BUILD_ARCH_ENDIAN)



FAILED_TESTS:='primer_masker' \

P3CORE_FAILED_TESTS:='primer_masker' \

	      'primer_masker_formatted'



FAILED_TESTS:=testmasker



%:

	dh $@ --sourcedirectory=src
@@ -20,14 +22,18 @@ override_dh_auto_build: 
override_dh_auto_test:

ifneq ($(BUILDARCH),little)

	cp -a test/p3test.pl test/p3test.pl~

	cp -a test/Makefile test/Makefile~

	# exclude tests known to fail on big endian

	# See README.source for further explanation.

	for tst in $(FAILED_TESTS) ; do sed -i "/$${tst}/d" test/p3test.pl ; done

	for tst in $(P3CORE_FAILED_TESTS) ; do sed -i "/$${tst}/d" test/p3test.pl ; done

	sed -i "0,/$(FAILED_TESTS)/s///" test/Makefile

	sed -i "/$(FAILED_TESTS)/,/endif/d" test/Makefile

endif

	dh_auto_test --sourcedirectory=test

ifneq ($(BUILDARCH),little)

	# restore original test file

	mv test/p3test.pl~ test/p3test.pl

	mv test/Makefile~ test/Makefile

endif

	dh clean --sourcedirectory=test
@@ -36,9 +42,13 @@ override_dh_installexamples: 
	dh_installexamples

	mkdir -p $(sampledir)/test;

	mkdir -p $(sampledir)/src;

	mkdir -p $(sampledir)/settings_files;

	mkdir -p $(sampledir)/kmer_lists;

	cp -aR ./test/* $(sampledir)/test;

	cp -aR ./src/humrep_and_simple.txt $(sampledir)/src;

	cp -a settings_files/primer*.txt $(sampledir)/;

	cp -a settings_files/primer*.txt $(sampledir)/settings_files;

	cp -aR ./kmer_lists/*.list $(sampledir)/kmer_lists;



	chmod -x $(sampledir)/test/thal*;

	sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' $(sampledir)/test/long_seq_tm_test.pl ;

	sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' $(sampledir)/test/vgrep.pl ;