debian/README.test

+Notes on how this package can be tested.
+_______________________________________
+
+This package can be tested by execution
+
+	sh run-unit-test
+
+in order to confirm it's integrity.

debian/changelog

+prodigal (1:2.6.3-2) UNRELEASED; urgency=medium
+
+  * Team upload.
+  * Fix "Please provide autopkgtest" Autopkgtest added
+    (Closes: #890783)
+  * Standards-Version: 4.1.3
+  * debhelper 11
+
+ -- Liubov Chuprikova <chuprikovalv@gmail.com>  Thu, 15 Mar 2018 23:36:47 +0000
+
 prodigal (1:2.6.3-1) unstable; urgency=medium
 
   * New upstream version

debian/control

@@ -4,8 +4,8 @@ Uploaders: Olivier Sallou <osallou@debian.org>,
            Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 9)
-Standards-Version: 3.9.7
+Build-Depends: debhelper (>= 11~)
+Standards-Version: 4.1.3
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/prodigal.git
 Vcs-Git: https://anonscm.debian.org/git/debian-med/prodigal.git
 Homepage: http://prodigal.ornl.gov/

debian/docs

 README*
+debian/tests/run-unit-test
+debian/tests/test-data
+debian/README.test

debian/tests/control

+Tests: run-unit-test
+Depends:@
+Restrictions: allow-stderr

debian/tests/run-unit-test

+#!/bin/bash
+set -e
+
+pkg="prodigal"
+
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+    AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+    trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
+fi
+
+cd $AUTOPKGTEST_TMP
+
+cp -a /usr/share/doc/${pkg}/test-data/ .
+gunzip -r *
+
+/usr/bin/prodigal -i test-data/genome.fna -o gene.coord.gbk -a protein.translations.faa -t testgenome.trn