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aggregate_scores_in_intervals.py Loading commit data...
align_print_template.py Loading commit data...
axt_extract_ranges.py Loading commit data...
axt_to_fasta.py Loading commit data...
axt_to_lav.py Loading commit data...
axt_to_maf.py Loading commit data...
bed_bigwig_profile.py Loading commit data...
bed_build_windows.py Loading commit data...
bed_complement.py Loading commit data...
bed_count_by_interval.py Loading commit data...
bed_count_overlapping.py Loading commit data...
bed_coverage.py Loading commit data...
bed_coverage_by_interval.py Loading commit data...
bed_diff_basewise_summary.py Loading commit data...
bed_extend_to.py Loading commit data...
bed_intersect.py Loading commit data...
bed_intersect_basewise.py Loading commit data...
bed_merge_overlapping.py Loading commit data...
bed_rand_intersect.py Loading commit data...
bed_subtract_basewise.py Loading commit data...
bnMapper.py Loading commit data...
div_snp_table_chr.py Loading commit data...
find_in_sorted_file.py Loading commit data...
gene_fourfold_sites.py Loading commit data...
get_scores_in_intervals.py Loading commit data...
int_seqs_to_char_strings.py Loading commit data...
interval_count_intersections.py Loading commit data...
interval_join.py Loading commit data...
lav_to_axt.py Loading commit data...
lav_to_maf.py Loading commit data...
line_select.py Loading commit data...
lzop_build_offset_table.py Loading commit data...
mMK_bitset.py Loading commit data...
maf_build_index.py Loading commit data...
maf_chop.py Loading commit data...
maf_chunk.py Loading commit data...
maf_col_counts.py Loading commit data...
maf_col_counts_all.py Loading commit data...
maf_count.py Loading commit data...
maf_covered_ranges.py Loading commit data...
maf_covered_regions.py Loading commit data...
maf_div_sites.py Loading commit data...
maf_drop_overlapping.py Loading commit data...
maf_extract_chrom_ranges.py Loading commit data...
maf_extract_ranges.py Loading commit data...
maf_extract_ranges_indexed.py Loading commit data...
maf_filter.py Loading commit data...
maf_filter_max_wc.py Loading commit data...
maf_gap_frequency.py Loading commit data...
maf_gc_content.py Loading commit data...
maf_interval_alignibility.py Loading commit data...
maf_limit_to_species.py Loading commit data...
maf_mapping_word_frequency.py Loading commit data...
maf_mask_cpg.py Loading commit data...
maf_mean_length_ungapped_piece.py Loading commit data...
maf_percent_columns_matching.py Loading commit data...
maf_percent_identity.py Loading commit data...
maf_print_chroms.py Loading commit data...
maf_print_scores.py Loading commit data...
maf_randomize.py Loading commit data...
maf_region_coverage_by_src.py Loading commit data...
maf_select.py Loading commit data...
maf_shuffle_columns.py Loading commit data...
maf_species_in_all_files.py Loading commit data...
maf_split_by_src.py Loading commit data...
maf_thread_for_species.py Loading commit data...
maf_tile.py Loading commit data...
maf_tile_2.py Loading commit data...
maf_tile_2bit.py Loading commit data...
maf_to_axt.py Loading commit data...
maf_to_concat_fasta.py Loading commit data...
maf_to_fasta.py Loading commit data...
maf_to_int_seqs.py Loading commit data...
maf_translate_chars.py Loading commit data...
maf_truncate.py Loading commit data...
maf_word_frequency.py Loading commit data...
mask_quality.py Loading commit data...
nib_chrom_intervals_to_fasta.py Loading commit data...
nib_intervals_to_fasta.py Loading commit data...
nib_length.py Loading commit data...
one_field_per_line.py Loading commit data...
out_to_chain.py Loading commit data...
prefix_lines.py Loading commit data...
pretty_table.py Loading commit data...
qv_to_bqv.py Loading commit data...
random_lines.py Loading commit data...
table_add_column.py Loading commit data...
table_filter.py Loading commit data...
tfloc_summary.py Loading commit data...
ucsc_gene_table_to_intervals.py Loading commit data...
wiggle_to_array_tree.py Loading commit data...
wiggle_to_binned_array.py Loading commit data...
wiggle_to_chr_binned_array.py Loading commit data...
wiggle_to_simple.py Loading commit data...