Commit 22db2456 authored by Michael R. Crusoe's avatar Michael R. Crusoe 🏳️‍🌈
Browse files

New upstream version 0.10.1

parent 5d634a66

PKG-INFO

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Metadata-Version: 1.1

Name: gffutils

Version: 0.9

Version: 0.10.1

Summary: Work with GFF and GTF files in a flexible database framework

Home-page: https://github.com/daler/gffutils

Author: Ryan Dale

gffutils.egg-info/PKG-INFO

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Metadata-Version: 1.1

Name: gffutils

Version: 0.9

Version: 0.10.1

Summary: Work with GFF and GTF files in a flexible database framework

Home-page: https://github.com/daler/gffutils

Author: Ryan Dale

gffutils.egg-info/SOURCES.txt

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@@ -16,9 +16,9 @@ gffutils/feature.py 
gffutils/gffwriter.py

gffutils/helpers.py

gffutils/inspect.py

gffutils/inspection.py

gffutils/interface.py

gffutils/iterators.py

gffutils/merge_criteria.py

gffutils/parser.py

gffutils/pybedtools_integration.py

gffutils/version.py
@@ -36,8 +36,11 @@ gffutils/test/feature_test.py 
gffutils/test/helpers_test.py

gffutils/test/parser_test.py

gffutils/test/performance_test.py

gffutils/test/synth_test_base.py

gffutils/test/test.py

gffutils/test/test_biopython_integration.py

gffutils/test/test_merge.py

gffutils/test/test_merge_all.py

gffutils/test/data/F3-unique-3.v2.gff

gffutils/test/data/FBgn0031208.gff

gffutils/test/data/FBgn0031208.gtf
@@ -67,6 +70,7 @@ gffutils/test/data/mouse_extra_comma.gff3 
gffutils/test/data/ncbi_gff3.txt

gffutils/test/data/nonascii

gffutils/test/data/random-chr.gff

gffutils/test/data/synthetic.gff3

gffutils/test/data/unsanitized.gff

gffutils/test/data/wormbase_gff2.txt

gffutils/test/data/wormbase_gff2_alt.txt
 
 No newline at end of file

gffutils.egg-info/requires.txt

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pyfaidx

six

argh

argcomplete

pyfaidx>=0.5.5.2

six>=1.12.0

argh>=0.26.2

argcomplete>=1.9.4

simplejson

gffutils/attributes.py

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import six

import collections



try:

    collectionsAbc = collections.abc

except AttributeError:

    collectionsAbc = collections

from gffutils import constants





# collections.MutableMapping is apparently the best way to provide dict-like

# interface (http://stackoverflow.com/a/3387975)

class Attributes(collections.MutableMapping):

class Attributes(collectionsAbc.MutableMapping):

    def __init__(self, *args, **kwargs):

        """

        An Attributes object acts much like a dictionary.  However, values are