Loading debian/changelog +2 −0 Original line number Diff line number Diff line Loading @@ -8,6 +8,8 @@ python-gffutils (0.9-1) UNRELEASED; urgency=medium * d/u/metadata: Added RRIDs * Added Python 2 packages, separated executable -- Steffen Moeller <moeller@debian.org> Sun, 15 Apr 2018 14:03:00 +0200 python-gffutils (0.8.7.1-1) REMOVED; urgency=medium Loading debian/control +48 −2 Original line number Diff line number Diff line Loading @@ -6,7 +6,14 @@ Priority: optional Build-Depends: debhelper (>= 10), dh-python, bedtools, python3, python-all, python-setuptools, python-simplejson, python-six, python-pyfaidx, python-nose, python-biopython, python-pybedtools, python3-all, python3-setuptools, python3-simplejson, Loading @@ -17,11 +24,24 @@ Build-Depends: debhelper (>= 10), python3-nose, python3-biopython, python3-pybedtools Standards-Version: 4.1.4 Standards-Version: 4.1.3 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python-gffutils.git Vcs-Git: https://anonscm.debian.org/git/debian-med/python-gffutils.git Homepage: https://daler.github.io/gffutils Package: python-gffutils Architecture: all Depends: ${python2:Depends}, ${misc:Depends} Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This is the Python 2 version. Package: python3-gffutils Architecture: all Depends: ${python3:Depends}, Loading @@ -32,3 +52,29 @@ Description: Work with GFF and GTF files in a flexible database framework sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This is the Python 3 version. Package: python-gffutils-bin Architecture: all Depends: ${misc:Depends}, python-gffutils Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This package offers Python 2 executables. Package: python3-gffutils-bin Architecture: all Depends: ${misc:Depends}, python3-gffutils Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This package offers Python 3 executables. debian/rules +10 −1 Original line number Diff line number Diff line Loading @@ -6,4 +6,13 @@ export PYBUILD_NAME=gffutils export PYBUILD_DISABLE=test # https://github.com/daler/gffutils/issues/91 %: dh $@ --with python3 --buildsystem=pybuild dh $@ --with python2,python3 --buildsystem=pybuild override_dh_auto_install: dh_auto_install mkdir -p debian/python-gffutils-bin/usr/bin mkdir -p debian/python3-gffutils-bin/usr/bin mv debian/python-gffutils/usr/bin/* debian/python-gffutils-bin/usr/bin/ mv debian/python3-gffutils/usr/bin/* debian/python3-gffutils-bin/usr/bin/ rm -rf debian/python-gffutils/usr/bin debian/python3-gffutils/usr/bin Loading
debian/changelog +2 −0 Original line number Diff line number Diff line Loading @@ -8,6 +8,8 @@ python-gffutils (0.9-1) UNRELEASED; urgency=medium * d/u/metadata: Added RRIDs * Added Python 2 packages, separated executable -- Steffen Moeller <moeller@debian.org> Sun, 15 Apr 2018 14:03:00 +0200 python-gffutils (0.8.7.1-1) REMOVED; urgency=medium Loading
debian/control +48 −2 Original line number Diff line number Diff line Loading @@ -6,7 +6,14 @@ Priority: optional Build-Depends: debhelper (>= 10), dh-python, bedtools, python3, python-all, python-setuptools, python-simplejson, python-six, python-pyfaidx, python-nose, python-biopython, python-pybedtools, python3-all, python3-setuptools, python3-simplejson, Loading @@ -17,11 +24,24 @@ Build-Depends: debhelper (>= 10), python3-nose, python3-biopython, python3-pybedtools Standards-Version: 4.1.4 Standards-Version: 4.1.3 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python-gffutils.git Vcs-Git: https://anonscm.debian.org/git/debian-med/python-gffutils.git Homepage: https://daler.github.io/gffutils Package: python-gffutils Architecture: all Depends: ${python2:Depends}, ${misc:Depends} Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This is the Python 2 version. Package: python3-gffutils Architecture: all Depends: ${python3:Depends}, Loading @@ -32,3 +52,29 @@ Description: Work with GFF and GTF files in a flexible database framework sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This is the Python 3 version. Package: python-gffutils-bin Architecture: all Depends: ${misc:Depends}, python-gffutils Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This package offers Python 2 executables. Package: python3-gffutils-bin Architecture: all Depends: ${misc:Depends}, python3-gffutils Description: Work with GFF and GTF files in a flexible database framework A Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone. . This package offers Python 3 executables.
debian/rules +10 −1 Original line number Diff line number Diff line Loading @@ -6,4 +6,13 @@ export PYBUILD_NAME=gffutils export PYBUILD_DISABLE=test # https://github.com/daler/gffutils/issues/91 %: dh $@ --with python3 --buildsystem=pybuild dh $@ --with python2,python3 --buildsystem=pybuild override_dh_auto_install: dh_auto_install mkdir -p debian/python-gffutils-bin/usr/bin mkdir -p debian/python3-gffutils-bin/usr/bin mv debian/python-gffutils/usr/bin/* debian/python-gffutils-bin/usr/bin/ mv debian/python3-gffutils/usr/bin/* debian/python3-gffutils-bin/usr/bin/ rm -rf debian/python-gffutils/usr/bin debian/python3-gffutils/usr/bin
