Add a patch to fix tests. Turn on testing (b0752f36) · Commits · Debian Med / python-pybedtools

debian/patches/define_filenotfounderror_python2.patch

0 → 100644

+36 −0

Original line number	Diff line number	Diff line
		Author: Liubov Chuprikova <chuprikovalv@gmail.com>
		Last-Update: Wed, 13 July 2018 11:36:44 +0300
		Description: Define FileNotFoundError as OSError for python 2


		--- a/pybedtools/test/test1.py
		+++ b/pybedtools/test/test1.py
		@@ -20,6 +20,12 @@
		import warnings


		+try:
		+ FileNotFoundError
		+except NameError:
		+ # python2
		+ FileNotFoundError = OSError
		+

		def fix(x):
		"""
		--- a/pybedtools/contrib/bigwig.py
		+++ b/pybedtools/contrib/bigwig.py
		@@ -6,6 +6,13 @@
		import subprocess


		+try:
		+ FileNotFoundError
		+except NameError:
		+ # python2
		+ FileNotFoundError = OSError
		+
		+
		def mapped_read_count(bam, force=False):
		"""
		Scale is cached in a bam.scale file containing the number of mapped reads.

+1 −0

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		@@ -4,3 +4,4 @@ disable-write-version
		disable-test-156
		rename-scripts
		c8dff864dbc942bb7adb3e719b0702f7e3989d36.patch
		define_filenotfounderror_python2.patch

+0 −2

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		@@ -27,5 +27,3 @@ override_dh_auto_install:
		rm -fr debian/python-pybedtools/usr/bin
		rm -fr debian/python3-pybedtools/usr/bin

		override_dh_auto_test:
		echo "Not testing."