New upstream version 0.5.3.1
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- .codecov.yml 4 additions, 0 deletions.codecov.yml
- .travis.yml 12 additions, 4 deletions.travis.yml
- CODE_OF_CONDUCT.md 46 additions, 0 deletionsCODE_OF_CONDUCT.md
- README.rst 106 additions, 31 deletionsREADME.rst
- pyfaidx/__init__.py 495 additions, 161 deletionspyfaidx/__init__.py
- pyfaidx/cli.py 57 additions, 28 deletionspyfaidx/cli.py
- scripts/benchmark.py 31 additions, 0 deletionsscripts/benchmark.py
- tests/data/chr17.hg19.part.fa 2 additions, 0 deletionstests/data/chr17.hg19.part.fa
- tests/data/download_gene_fasta.py 7 additions, 0 deletionstests/data/download_gene_fasta.py
- tests/data/gene.bed12 1 addition, 0 deletionstests/data/gene.bed12
- tests/data/gene.bed12.fasta 2 additions, 0 deletionstests/data/gene.bed12.fasta
- tests/test_FastaRecord.py 24 additions, 0 deletionstests/test_FastaRecord.py
- tests/test_FastaRecord_iter.py 7 additions, 0 deletionstests/test_FastaRecord_iter.py
- tests/test_FastaVariant.py 3 additions, 0 deletionstests/test_FastaVariant.py
- tests/test_Fasta_bgzip.py 258 additions, 0 deletionstests/test_Fasta_bgzip.py
- tests/test_faidx.py 14 additions, 0 deletionstests/test_faidx.py
- tests/test_feature_bounds_check.py 3 additions, 3 deletionstests/test_feature_bounds_check.py
- tests/test_feature_indexing.py 66 additions, 27 deletionstests/test_feature_indexing.py
- tests/test_feature_key_function.py 14 additions, 0 deletionstests/test_feature_key_function.py
- tests/test_feature_spliced_seq.py 74 additions, 0 deletionstests/test_feature_spliced_seq.py
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