Add publication and some other changes

               dh-python,

               python3,

               python3-setuptools,

               python3-skbio,

               qiime

Standards-Version: 4.3.0

Vcs-Browser: https://salsa.debian.org/med-team/q2-alignment

         python3-setuptools,

         python3-skbio,

         qiime,

         q2-types  # TODO

         mafft,

         sina    # TODO

         mafft

Description: QIIME 2 plugin for generating and manipulating alignments

 <long_description>

# see https://lists.debian.org/debian-med/2018/06/msg00043.html

#PKGNAME#: script-with-language-extension usr/bin/*.*

# export DEB_BUILD_MAINT_OPTIONS=hardening=+all

%:

	dh $@

	dh $@ --with python3 --buildsystem=pybuild

### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected

#override_dh_auto_test:

Reference:

  Author: 

  Title: 

  Journal: 

  Year: 

  Volume: 

  Number: 

  Pages: 

  DOI: 

  PMID:

  URL: 

  eprint: 

  Author: >

    Evan Bolyen and Jai Ram Rideout and Matthew R Dillon and Nicholas A

    Bokulich and Christian Abnet and Gabriel A Al-Ghalith and Harriet Alexander and

    Eric J Alm and Manimozhiyan Arumugam and Francesco Asnicar and Yang Bai and

    Jordan E Bisanz and Kyle Bittinger and Asker Brejnrod and Colin J Brislawn and

    C Titus Brown and Benjamin J Callahan and Andrés Mauricio Caraballo-Rodríguez

    and John Chase and Emily Cope and Ricardo Da Silva and Pieter C Dorrestein and

    Gavin M Douglas and Daniel M Durall and Claire Duvallet and Christian F

    Edwardson and Madeleine Ernst and Mehrbod Estaki and Jennifer Fouquier and

    Julia M Gauglitz and Deanna L Gibson and Antonio Gonzalez and Kestrel Gorlick

    and Jiarong Guo and Benjamin Hillmann and Susan Holmes and Hannes Holste and

    Curtis Huttenhower and Gavin Huttley and Stefan Janssen and Alan K Jarmusch and

    Lingjing Jiang and Benjamin Kaehler and Kyo Bin Kang and Christopher R Keefe

    and Paul Keim and Scott T Kelley and Dan Knights and Irina Koester and Tomasz

    Kosciolek and Jorden Kreps and Morgan GI Langille and Joslynn Lee and Ruth Ley

    and Yong-Xin Liu and Erikka Loftfield and Catherine Lozupone and Massoud Maher

    and Clarisse Marotz and Bryan D Martin and Daniel McDonald and Lauren J McIver

    and Alexey V Melnik and Jessica L Metcalf and Sydney C Morgan and Jamie Morton

    and Ahmad Turan Naimey and Jose A Navas-Molina and Louis Felix Nothias and

    Stephanie B Orchanian and Talima Pearson and Samuel L Peoples and Daniel Petras

    and Mary Lai Preuss and Elmar Pruesse and Lasse Buur Rasmussen and Adam Rivers

    and Michael S Robeson and Patrick Rosenthal and Nicola Segata and Michael

    Shaffer and Arron Shiffer and Rashmi Sinha and Se Jin Song and John R Spear and

    Austin D Swafford and Luke R Thompson and Pedro J Torres and Pauline Trinh and

    Anupriya Tripathi and Peter J Turnbaugh and Sabah Ul-Hasan and Justin JJ van

    der Hooft and Fernando Vargas and Yoshiki Vázquez-Baeza and Emily Vogtmann and

    Max von Hippel and William Walters and Yunhu Wan and Mingxun Wang and Jonathan

    Warren and Kyle C Weber and Chase HD Williamson and Amy D Willis and Zhenjiang

    Zech Xu and Jesse R Zaneveld and Yilong Zhang and Qiyun Zhu and Rob Knight and

    J Gregory Caporaso

  Title: >

    QIIME 2: Reproducible, interactive, scalable, and extensible microbiome

    data science

  Journal: PeerJ Preprints

  Year: 2018

  Volume: 6

  DOI: 10.7287/peerj.preprints.27295v2

  URL: https://peerj.com/preprints/27295/

  eprint: https://peerj.com/preprints/27295.pdf