Commit 20bdd0c7 authored by Liubov Chuprikova's avatar Liubov Chuprikova
Browse files

Adapt d/copyright to Qiime2

parent 458dbb99
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@@ -7,6 +7,7 @@ qiime (2018.8.0-1) UNRELEASED; urgency=medium

  [ Liubov Chuprikova ]
  * Make .egg-info available for build time tests
  * Adapt d/copyright to Qiime2

 -- Andreas Tille <tille@debian.org>  Fri, 19 Oct 2018 15:20:48 +0200

+28 −68
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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: QIIME 2
Upstream-Contact: Greg Caporaso <gregcaporaso@gmail.com>
Source: https://github.com/qiime2/qiime2/releases
Files-Excluded: 
    *.jar

Files: *
Copyright: 2010-2012 Greg Caporaso <gregcaporaso@gmail.com>,
                     Jens Reeder <jens.reeder@gmail.com>,
                     Kyle Bittinger and others
License: GPL-2+

Files: qiime_test_data/align_seqs/core_set_aligned.fasta.imputed
Copyright: (C) The Greengenes Database Consortium <http://greengenes.secondgenome.com/>
License: CC-BY-SA 
 The Greengenes Database by The Greengenes Database Consortium is licensed under
 a Creative Commons Attribution-ShareAlike 3.0 Unported License.
 .
 Academic users should cite:
   DeSantis, T. Z., P. Hugenholtz, N. Larsen, M. Rojas, E. L. Brodie, K. Keller,
   T. Huber, D. Dalevi, P. Hu, and G. L. Andersen. 2006.
   Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible
   with ARB. Appl Environ Microbiol 72:5069-72.

Files: qiime/support_files/js/jquery.js
Copyright: John Resig <jquery.com>
License: GPL-2+ or MIT
Comment: Dual licensed under the MIT (MIT-LICENSE.txt)
 and GPL (GPL-LICENSE.txt) licenses.

Files: qiime/support_files/js/jquery.tablednd_0_5.js
Copyright: Denis Howlett <denish@isocra.com>
License: MIT

Files: qiime/support_files/js/overlib.js
Copyright: 1998-2004 Erik Bosrup. All rights reserved.
License: overlib
 Contributors are listed on the homepage.
 This file might be old, always check for the latest version at:
   https://github.com/overlib/overlib
 .
 Please read the license agreement (available through the link above)
 before using overLIB. Direct any licensing questions to erik@bosrup.com.
 .
 Do not sell this as your own work or remove this copyright notice.
 For full details on copying or changing this script please read the
 license agreement at the link above. Please give credit on sites that
 use overLIB and submit changes of the script so other people can use
 them as well.
Comment: The link above throws 404
 Project moved to Github but the License file was not moved.
Copyright: 2016-2018 QIIME 2 development team
License: BSD-3-clause

Files: debian/*
Copyright: 2010 Sri Girish Srinivasa Murthy <srigirish@evolbio.mpg.de>
@@ -58,6 +13,32 @@ Copyright: 2010 Sri Girish Srinivasa Murthy <srigirish@evolbio.mpg.de>
                Andreas Tille <tille@debian.org>
License: GPL-2+

License: BSD-3-clause
  Redistribution and use in source and binary forms, with or without
  modification, are permitted provided that the following conditions are met:
  .
  1.  Redistributions of source code must retain the above copyright notice,
      this list of conditions and the following disclaimer.
  .
  2.  Redistributions in binary form must reproduce the above copyright notice,
      this list of conditions and the following disclaimer in the documentation
      and/or other materials provided with the distribution.
  .
  3.  Neither the name of the copyright holder nor the names of its
      contributors may be used to endorse or promote products derived from this
      software without specific prior written permission.
  .
  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
  AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
  IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
  DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
  FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
  DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
  SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
  CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
  OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
  OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

License: GPL-2+
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -77,24 +58,3 @@ License: GPL-2+
 .
 On a Debian system, the GNU GPL license version 2 is distributed in the
 file /usr/share/common-licenses/GPL-2.

License: MIT
 Permission is hereby granted, free of charge, to any person obtaining a
 copy of this software and associated documentation files (the
 "Software"), to deal in the Software without restriction, including
 without limitation the rights to use, copy, modify, merge, publish,
 distribute, sublicense, and/or sell copies of the Software, and to
 permit persons to whom the Software is furnished to do so, subject to
 the following conditions:
 .
 The above copyright notice and this permission notice shall be included
 in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
 OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
 CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
 TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
 SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.