Loading debian/patches/2to3.patch +39 −0 Original line number Diff line number Diff line Loading @@ -2,6 +2,45 @@ Description: Use 2to3 to port to Python3 Bug-Debian: https://bugs.debian.org/938330 Author: Andreas Tille <tille@debian.org> Last-Update: Thu, 05 Sep 2019 10:06:47 +0200 Comment: Attention: this is not fully working. The build runs into running build_scripts creating build creating build/scripts-3.7 Traceback (most recent call last): File "/usr/lib/python3.7/tokenize.py", line 385, in find_cookie line_string = line.decode('utf-8') UnicodeDecodeError: 'utf-8' codec can't decode byte 0xf0 in position 24: invalid continuation byte During handling of the above exception, another exception occurred: Traceback (most recent call last): File "setup.py", line 43, in <module> cmdclass={'build': MakeBuild} File "/usr/lib/python3.7/distutils/core.py", line 148, in setup dist.run_commands() File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands self.run_command(cmd) File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command cmd_obj.run() File "setup.py", line 28, in run DistutilsBuild.run(self) File "/usr/lib/python3.7/distutils/command/build.py", line 135, in run self.run_command(cmd_name) File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/usr/lib/python3.7/distutils/command/build_scripts.py", line 50, in run self.copy_scripts() File "/usr/lib/python3.7/distutils/command/build_scripts.py", line 82, in copy_scripts encoding, lines = tokenize.detect_encoding(f.readline) File "/usr/lib/python3.7/tokenize.py", line 426, in detect_encoding encoding = find_cookie(first) File "/usr/lib/python3.7/tokenize.py", line 390, in find_cookie raise SyntaxError(msg) SyntaxError: invalid or missing encoding declaration for 'bin/ragout-maf2synteny' --- a/ragout/assembly_graph/assembly_refine.py +++ b/ragout/assembly_graph/assembly_refine.py Loading Loading
debian/patches/2to3.patch +39 −0 Original line number Diff line number Diff line Loading @@ -2,6 +2,45 @@ Description: Use 2to3 to port to Python3 Bug-Debian: https://bugs.debian.org/938330 Author: Andreas Tille <tille@debian.org> Last-Update: Thu, 05 Sep 2019 10:06:47 +0200 Comment: Attention: this is not fully working. The build runs into running build_scripts creating build creating build/scripts-3.7 Traceback (most recent call last): File "/usr/lib/python3.7/tokenize.py", line 385, in find_cookie line_string = line.decode('utf-8') UnicodeDecodeError: 'utf-8' codec can't decode byte 0xf0 in position 24: invalid continuation byte During handling of the above exception, another exception occurred: Traceback (most recent call last): File "setup.py", line 43, in <module> cmdclass={'build': MakeBuild} File "/usr/lib/python3.7/distutils/core.py", line 148, in setup dist.run_commands() File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands self.run_command(cmd) File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command cmd_obj.run() File "setup.py", line 28, in run DistutilsBuild.run(self) File "/usr/lib/python3.7/distutils/command/build.py", line 135, in run self.run_command(cmd_name) File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/usr/lib/python3.7/distutils/command/build_scripts.py", line 50, in run self.copy_scripts() File "/usr/lib/python3.7/distutils/command/build_scripts.py", line 82, in copy_scripts encoding, lines = tokenize.detect_encoding(f.readline) File "/usr/lib/python3.7/tokenize.py", line 426, in detect_encoding encoding = find_cookie(first) File "/usr/lib/python3.7/tokenize.py", line 390, in find_cookie raise SyntaxError(msg) SyntaxError: invalid or missing encoding declaration for 'bin/ragout-maf2synteny' --- a/ragout/assembly_graph/assembly_refine.py +++ b/ragout/assembly_graph/assembly_refine.py Loading