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Commits on Source (2)
Add TODO about spdlog code copy
· 7243a997
Andreas Tille
authored
Dec 13, 2018
7243a997
More missing headers for salmon
· 203ed6e5
Andreas Tille
authored
Dec 13, 2018
203ed6e5
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debian/TODO
0 → 100644
View file @
203ed6e5
Replace code copy of spdlog by Debian packaged version once either
upstream might have switched (see
https://github.com/COMBINE-lab/RapMap/issues/44
) or we can develop a patch to adapt RapMap code to Debian spdlog.
debian/changelog
View file @
203ed6e5
rapmap (0.12.0+dfsg-2) UNRELEASED; urgency=medium
* Add further header files to rapmap-dev since these are used in salmon
-- Andreas Tille <tille@debian.org> Wed, 12 Dec 2018 23:15:17 +0100
rapmap (0.12.0+dfsg-1) unstable; urgency=medium
* New upstream version
...
...
debian/rapmap-dev.install
View file @
203ed6e5
...
...
@@ -6,16 +6,23 @@ src/RapMapSAIndex.cpp usr/share/rapmap/src
src
/
RapMapSAIndexer
.
cpp
usr
/
share
/
rapmap
/
src
src
/
RapMapUtils
.
cpp
usr
/
share
/
rapmap
/
src
include
/
bit_
*.
h
usr
/
include
/
rapmap
include
/
kseq
.
h
usr
/
include
/
rapmap
include
/
macros
.
h
usr
/
include
/
rapmap
include
/
rank9b
.
h
usr
/
include
/
rapmap
include
/
chobo
/
small_vector
.
hpp
usr
/
include
/
chobo
include
/
chobo
/
small_vector
.
hpp
usr
/
include
/
rapmap
/
chobo
include
/
sparsepp
/
spp
.
h
usr
/
include
/
rapmap
/
sparsepp
include
/
sparsepp
/
spp_config
.
h
usr
/
include
/
rapmap
/
sparsepp
include
/
sparsepp
/
spp_stdint
.
h
usr
/
include
/
rapmap
/
sparsepp
include
/
sparsepp
/
spp_traits
.
h
usr
/
include
/
rapmap
/
sparsepp
include
/
sparsepp
/
spp_utils
.
h
usr
/
include
/
rapmap
/
sparsepp
include
/
Boo
*.
hpp
usr
/
include
/
rapmap
include
/
FrugalBooMap
.
hpp
usr
/
include
/
rapmap
include
/
IndexHeader
.
hpp
usr
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include
/
rapmap
include
/
Kmer
.
hpp
usr
/
include
/
rapmap
include
/
RapMapConfig
.
hpp
usr
/
include
/
rapmap
include
/
RapMapFileSystem
.
hpp
usr
/
include
/
rapmap
include
/
RapMapSAIndex
.
hpp
usr
/
include
/
rapmap
include
/
RapMapUtils
.
hpp
usr
/
include
/
rapmap
include
/
SparseHashSerializer
.
hpp
usr
/
include
/
rapmap
include
/
SpinLock
.
hpp
usr
/
include
/
rapmap