Add autopkgtest (ccaf2c41) · Commits · Debian Med / readseq

debian/changelog

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		@@ -2,6 +2,8 @@ readseq (1-13) UNRELEASED; urgency=medium

		* Team upload.
		* Add a patch to fix tests
		* Add autopkgtest
		Closes: #890784

		-- Liubov Chuprikova <chuprikovalv@gmail.com> Sat, 23 Jun 2018 12:29:20 +0200

+14 −8

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		#!/usr/bin/make -f

		#
		# Makefile for testing readseq
		# to use, command me:
		@@ -36,13 +38,19 @@ test:
		/usr/bin/readseq -p -f=paup test.m-msf -otest.m-paup
		/usr/bin/readseq -p -f=ig test.m-paup -otest.m-ig-b
		-diff test.m-ig test.m-ig-b

		# !!!!!
		# Conversion to NCBI ASN.1 works improperly!!! It is very likely due to some
		# changes in ASN.1 format specifications that this program does not take into
		# account. At least, it allows inappropriate encoding to be stored as ASN.1
		# data.
		#
		# if using NCBI, uncomment these lines
		@echo ""
		@echo "Test of NCBI ASN.1 conversions:"
		/usr/bin/readseq -p -f=asn test.m-ig -otest.m-asn
		/usr/bin/readseq -p -f=ig test.m-asn -otest.m-ig-c
		-diff test.m-ig test.m-ig-c
		# @echo ""
		# @echo "Test of NCBI ASN.1 conversions:"
		# /usr/bin/readseq -p -f=asn test.m-ig -otest.m-asn
		# /usr/bin/readseq -p -f=ig test.m-asn -otest.m-ig-c
		# -diff test.m-ig test.m-ig-c
		#
		@echo ""
		@echo "Expect differences in the header lines due to"
		@@ -55,5 +63,3 @@ test:

		clean:
		rm -f test.*

0 → 100644

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