debian/changelog

+samtools (1.9-3) unstable; urgency=medium
+
+  * Do not force sse for i386
+    Closes: #921315
+  * debhelper 12
+  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
+
+ -- Andreas Tille <tille@debian.org>  Mon, 04 Feb 2019 08:08:28 +0100
+
 samtools (1.9-2) unstable; urgency=medium
 
   * Team upload.

debian/compat

-11
+12

debian/control

@@ -4,7 +4,7 @@ Uploaders: Charles Plessy <plessy@debian.org>,
            Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper (>= 12~),
                bash-completion,
 #              libio-pty-perl is needed by the regression test.
                libio-pty-perl,

debian/rules

@@ -5,7 +5,7 @@ export CURSES_LIB=-lcurses
 
 export DEB_BUILD_MAINT_OPTIONS=hardening=+all
 ifneq (,$(filter $(DEB_HOST_ARCH),i386 kfreebsd-i386 hurd-i386))
-  export DEB_CFLAGS_MAINT_APPEND=-msse -mfpmath=sse
+  export DEB_CFLAGS_MAINT_APPEND=-ffloat-store
 endif
 
 %:
@@ -29,8 +29,10 @@ override_dh_auto_build:
 	  LDFLAGS="$$(dpkg-buildflags --get LDFLAGS)"
 
 override_dh_auto_test:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	dh_auto_test -- \
 	  BGZIP=/usr/bin/bgzip
+endif
 
 override_dh_auto_install:
 	dh_auto_install -- \