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Commits on Source (2)
seqan2 (2.4.0+dfsg-9) UNRELEASED; urgency=medium
seqan2 (2.4.0+dfsg-9) unstable; urgency=medium
[ Michael R. Crusoe ]
* Generate the CWL descriptions automatically, now that CTDConverter is
packaged.
(This does not work and was deactivated in favour of fixing bug #892223
quickly.)
[ Steve Langasek ]
* use alignment-safe buffer handling
......@@ -17,9 +19,8 @@ seqan2 (2.4.0+dfsg-9) UNRELEASED; urgency=medium
automatically installed. This should not be necessary and should
be removed in next revision.)
* debian/rules: Fix PATH in attempt to create CWL descriptions
TODO: Fix generation of CWL descriptions
-- Andreas Tille <tille@debian.org> Tue, 04 Dec 2018 11:19:05 +0100
-- Andreas Tille <tille@debian.org> Wed, 05 Dec 2018 11:36:39 +0100
seqan2 (2.4.0+dfsg-8) unstable; urgency=medium
......
......@@ -78,14 +78,14 @@ override_dh_install-arch:
find $(CURDIR)/debian/$(pkgapps) -type f -name LICENSE -delete || /bin/true
find $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin -type f \
-name "*.sh" | xargs chmod a+x
for app in $$(ls $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin); \
do $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin/$${app} \
--write-ctd $${app}.ctd && CTDConverter cwl -i $${app}.ctd \
-o $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl/${app}.cwl; \
done;
rm *.ctd
find $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl -type f \
-name "*.cwl" | xargs chmod a+x
# for app in $$(ls $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin); \
# do $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin/$${app} \
# --write-ctd $${app}.ctd && CTDConverter cwl -i $${app}.ctd \
# -o $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl/${app}.cwl; \
# done;
# rm *.ctd
# find $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl -type f \
# -name "*.cwl" | xargs chmod a+x
override_dh_auto_clean:
dh_auto_clean
......