Commit ce6580fa authored by Shayan Doust's avatar Shayan Doust
Browse files

Add headers to the patches

parent c924870b

debian/patches/2to3.patch

+11 −6
Original line number Diff line number Diff line 
Description: port over python files using python2 to python3

Author: Shayan Doust <hello@shayandoust.me>

Last-Update: 2019-09-13

---



Index: simka/simkaMin/simkaMin.py

===================================================================

--- simka.orig/simkaMin/simkaMin.py	2019-09-12 06:14:44.083241551 +0100

+++ simka/simkaMin/simkaMin.py	2019-09-12 06:14:44.075241578 +0100

--- simka.orig/simkaMin/simkaMin.py	2019-09-13 00:56:25.479363956 +0100

+++ simka/simkaMin/simkaMin.py	2019-09-13 00:56:25.475363978 +0100

@@ -1,4 +1,4 @@

-#!/usr/bin/env python

+#!/usr/bin/python3
@@ -25,8 +30,8 @@ Index: simka/simkaMin/simkaMin.py 
+print(("Result dir: " + args.out))

Index: simka/simkaMin/simkaMin_update.py

===================================================================

--- simka.orig/simkaMin/simkaMin_update.py	2019-09-12 06:14:44.083241551 +0100

+++ simka/simkaMin/simkaMin_update.py	2019-09-12 06:14:44.079241565 +0100

--- simka.orig/simkaMin/simkaMin_update.py	2019-09-13 00:56:25.479363956 +0100

+++ simka/simkaMin/simkaMin_update.py	2019-09-13 00:56:25.475363978 +0100

@@ -1,4 +1,4 @@

-#!/usr/bin/env python

+#!/usr/bin/python3
@@ -50,8 +55,8 @@ Index: simka/simkaMin/simkaMin_update.py 
+print(("Result dir: " + existingDir))

Index: simka/tests/simple_test.py

===================================================================

--- simka.orig/tests/simple_test.py	2019-09-12 06:14:44.039241699 +0100

+++ simka/tests/simple_test.py	2019-09-12 06:15:23.251110325 +0100

--- simka.orig/tests/simple_test.py	2019-09-13 00:56:25.479363956 +0100

+++ simka/tests/simple_test.py	2019-09-13 00:56:25.475363978 +0100

@@ -18,7 +18,7 @@

 	for filename_gz in result_filenames:

 		#filename_gz = result_dir + "/" + filename

debian/patches/fix_test_path.patch

+9 −4
Original line number Diff line number Diff line 
Description: modify the test python files to use binaries in /usr/bin

Author: Shayan Doust <hello@shayandoust.me>

Last-Update: 2019-09-13

---



Index: simka/tests/simkaMin/test_simkaMin.py

===================================================================

--- simka.orig/tests/simkaMin/test_simkaMin.py	2019-09-11 23:39:55.656682381 +0100

+++ simka/tests/simkaMin/test_simkaMin.py	2019-09-12 06:10:03.252182437 +0100

--- simka.orig/tests/simkaMin/test_simkaMin.py	2019-09-13 00:54:35.331977272 +0100

+++ simka/tests/simkaMin/test_simkaMin.py	2019-09-13 00:54:35.327977295 +0100

@@ -48,7 +48,7 @@

             for nb_reads in NB_READS:

                 for nb_kmers in NB_KMERS:
@@ -69,8 +74,8 @@ Index: simka/tests/simkaMin/test_simkaMin.py 
             if ret != 0: exit(1)

Index: simka/tests/simple_test.py

===================================================================

--- simka.orig/tests/simple_test.py	2019-09-11 23:39:55.668682342 +0100

+++ simka/tests/simple_test.py	2019-09-12 06:14:31.939282238 +0100

--- simka.orig/tests/simple_test.py	2019-09-13 00:54:35.331977272 +0100

+++ simka/tests/simple_test.py	2019-09-13 00:54:35.327977295 +0100

@@ -91,7 +91,7 @@

 #test k=31 t=0

 clear()