Commit 8f060bf0 authored by Sascha Steinbiss's avatar Sascha Steinbiss
Browse files

New upstream version 2.4.1

parent fa7d887c

.gitignore

+3 −0
Original line number Diff line number Diff line
@@ -33,3 +33,6 @@ run-all-tests* 
src/snp-sites

tests/.deps/*

tests/.dirstamp

# vagrant runtime stuff

.vagrant

ubuntu-*-cloudimg-console.log

Dockerfile

+3 −3
Original line number Diff line number Diff line
@@ -6,7 +6,7 @@ FROM debian:testing 
#

#  Authorship

#

MAINTAINER ap13@sanger.ac.uk

MAINTAINER path-help@sanger.ac.uk



#

# Pull in packages from testing
@@ -14,6 +14,6 @@ MAINTAINER ap13@sanger.ac.uk 
RUN apt-get update -qq



#

# Install Roary

# Install SNP-sites

#

RUN apt-get install snp-sites
 
RUN apt-get -y install snp-sites

README.md

+8 −3
Original line number Diff line number Diff line
@@ -4,6 +4,11 @@ Rapidly extracts SNPs from a multi-FASTA alignment. 
[![Build Status](https://travis-ci.org/sanger-pathogens/snp-sites.png?branch=master)](https://travis-ci.org/sanger-pathogens/snp-sites)   

[![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-brightgreen.svg)](https://github.com/sanger-pathogens/snp-sites/blob/master/LICENSE)   

[![status](https://img.shields.io/badge/MGEN-10.1099%2Fmgen.0.000056-brightgreen.svg)](http://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000056)   

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg)](http://bioconda.github.io/recipes/gubbins/README.html)  

[![Container ready](https://img.shields.io/badge/container-ready-brightgreen.svg)](https://quay.io/repository/biocontainers/gubbins)  

[![Docker Build Status](https://img.shields.io/docker/build/sangerpathogens/gubbins.svg)](https://hub.docker.com/r/sangerpathogens/gubbins)  

[![Docker Pulls](https://img.shields.io/docker/pulls/sangerpathogens/gubbins.svg)](https://hub.docker.com/r/sangerpathogens/gubbins)  





## Contents

* [Introduction](#introduction)

VERSION

+1 −1
Original line number Diff line number Diff line 
2.4.0
 
2.4.1

_config.yml

0 → 100644
+1 −0
Original line number Diff line number Diff line 
theme: jekyll-theme-cayman
 
 No newline at end of file