Commit d4065f30 authored by Steffen Möller's avatar Steffen Möller
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debian/README.Debian

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solvate for Debian

------------------



<possible notes regarding this package - if none, delete this file>



 -- Steffen Moeller <moeller@debian.org>  Fri, 28 Dec 2007 01:45:03 +0100

debian/changelog

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solvate (1.0-2) UNRELEASED; urgency=low

solvate (1.0-2) unstable; urgency=low



  [ David Paleino ]

  * Updated to Standards-Version 3.7.3 (no changes needed)
@@ -9,9 +9,12 @@ solvate (1.0-2) UNRELEASED; urgency=low 
  [ Andreas Tille ]

  * Moved packaging from SVN to Git



  [ Steffen Moeller ]

  * Now truly releasing (Closes: #900483).



 -- Charles Plessy <charles-debian-nospam@plessy.org>  Sat, 22 Mar 2008 11:32:31 +0900



solvate (1.0-1) unstable; urgency=low

solvate (1.0-1) UNRELEASED; urgency=low



  * Initial release.

debian/control

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Source: solvate

Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Uploaders: Steffen Moeller <moeller@debian.org>

Uploaders: Steffen Moeller <moeller@debian.org>, Charles Plessy <charles-debian-nospam@plessy.org>

Section: non-free/science

XS-Autobuild: no

XS-Autobuild: yes

Priority: optional

Build-Depends: debhelper (>= 10)

Standards-Version: 4.1.2

Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/solvate.git

Vcs-Git: https://anonscm.debian.org/git/debian-med/solvate.git

Standards-Version: 4.1.4

Vcs-Browser: https://salsa.debian.org/med-team/solvate

Vcs-Git: https://salsa.debian.org/med-team/solvate.git

Homepage: http://www.mpibpc.mpg.de/grubmueller/solvate



Package: solvate

Architecture: any

Depends: ${shlibs:Depends},

         ${misc:Depends}

Description: sets water molecules around protein structures

Description: arranges water molecules around protein structures

 For molecular dynamics simulations it is sometimes appropriate

 not to model in the vacuum but to have the proteins surrounded

 by their solvent. This program computes the location of water
@@ -23,6 +23,7 @@ Description: sets water molecules around protein structures 


Package: solvate-doc

Architecture: all

Depends: ${misc:Depends}

Description: Documentation for solvate

 HTML documentation for solvate, the tool to prepare

 water cubes around proteins.

debian/rules

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@@ -7,68 +7,19 @@ 
# This has to be exported to make some magic below work.

export DH_OPTIONS



CFLAGS=-O2

CFLAGS=-O2 -g



#Architecture 

build: build-arch build-indep

%:

	dh $@



build-arch: build-arch-stamp

build-arch-stamp:

override_dh_auto_build:

	# equivalent to upstream's Makefiles

	gcc $(CFLAGS) -o solvate solvate.c -lm

	touch $@

	$(CC) $(CFLAGS) -o solvate solvate.c -lm



build-indep: build-indep-stamp

build-indep-stamp:

	touch $@

override_dh_auto_clean:

	dh_auto_clean

	rm -f solvate



clean:

	dh_testdir

	dh_testroot

	rm -f build-arch-stamp build-indep-stamp configure-stamp

	dh_clean solvate

#	# in debian/solvate-doc.docs

#	#cp *.pdb *.psf $(CURDIR)/debian/solvate/usr/share/doc/solvate-doc/

install: install-indep install-arch

install-indep:

	dh_testdir

	dh_testroot

	dh_clean -k -i 

	dh_installdirs -i

	dh_install -i

	# in debian/solvate-doc.docs

	#cp *.pdb *.psf $(CURDIR)/debian/solvate/usr/share/doc/solvate-doc/



install-arch:

	dh_testdir

	dh_testroot

	dh_clean -k -s 

	dh_installdirs -s

	cp solvate $(CURDIR)/debian/solvate/usr/bin/



	dh_install -s



binary-common:

	dh_testdir

	dh_testroot

	dh_installchangelogs 

	dh_installdocs

	dh_installman

	dh_link

	dh_strip

	dh_compress 

	dh_fixperms

	dh_makeshlibs

	dh_installdeb

	dh_shlibdeps

	dh_gencontrol

	dh_md5sums

	dh_builddeb



binary-indep: build-indep install-indep

	$(MAKE) -f debian/rules DH_OPTIONS=-i binary-common



binary-arch: build-arch install-arch

	$(MAKE) -f debian/rules DH_OPTIONS=-s binary-common



binary: binary-arch binary-indep

.PHONY: build clean binary-indep binary-arch binary install install-indep install-arch configure

debian/solvate-doc.doc-base

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@@ -5,5 +5,5 @@ Abstract: Complete usage instructions for solvate 
Section: Science/Biology



Format: HTML

Index: /usr/share/doc/solvate/docu_html/index.html

Files: /usr/share/doc/solvate/docu_html/*.html /usr/share/doc/solvate/docu_html/*.gif
 
Index: /usr/share/doc/solvate-doc/docu_html/docu.html

Files: /usr/share/doc/solvate-doc/docu_html/*.html /usr/share/doc/solvate-doc/docu_html/*.gif