debian/changelog

+staden-io-lib (1.14.11-3) unstable; urgency=medium
+
+  * Remove bashism in test script
+    Closes: #915460
+
+ -- Andreas Tille <tille@debian.org>  Tue, 04 Dec 2018 19:35:00 +0100
+
 staden-io-lib (1.14.11-2) unstable; urgency=medium
 
   * Fix build on non-x86 architectures (thanks to James Bonfield

debian/patches/pathmax.patch

@@ -20,7 +20,7 @@ Description: define PATH_MAX in case it is not available
      int i, n;
 --- a/io_lib/cram_io.c
 +++ b/io_lib/cram_io.c
-@@ -94,6 +94,14 @@
+@@ -107,6 +107,14 @@
  #include <stdio_ext.h>
  #endif
  

debian/patches/remove_bashism.patch

+Description: Remove bashism in test script
+Bug-Debian: https://bugs.debian.org/915460
+Author: Andreas Tille <tille@debian.org>
+Last-Update: Tue, 04 Dec 2018 19:32:55 +0100
+
+--- a/tests/scram.test
++++ b/tests/scram.test
+@@ -24,7 +24,7 @@ do
+ 
+ 
+     # Create BAM from SAM or SAM from BAM
+-    if [ `echo $i | sed 's/\.bam//'` == $i ]
++    if [ `echo $i | sed 's/\.bam//'` = $i ]
+     then
+ 	echo "$scramble $i $outdir/$root.bam"
+ 	$scramble $i $outdir/$root.bam || exit 1

debian/patches/series

 pathmax.patch
 fix_fseeko.patch
 fix_non_x86.patch
+remove_bashism.patch