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FastaTools.cpp Loading commit data...
FastaTools.h Loading commit data...
GBase.cpp Loading commit data...
GBase.h Loading commit data...
GFaSeqGet.cpp Loading commit data...
GFaSeqGet.h Loading commit data...
GHash.hh Loading commit data...
GList.hh Loading commit data...
GStr.cpp Loading commit data...
GStr.h Loading commit data...
GTFToFasta.cpp Loading commit data...
GTFToFasta.h Loading commit data...
GVec.hh Loading commit data...
Makefile.am Loading commit data...
Makefile.in Loading commit data...
align_status.cpp Loading commit data...
align_status.h Loading commit data...
alphabet.c Loading commit data...
alphabet.h Loading commit data...
assert_helpers.h Loading commit data...
bam2fastx.cpp Loading commit data...
bam_merge.cpp Loading commit data...
bam_merge.h Loading commit data...
bam_merge_impl.cpp Loading commit data...
bed_to_juncs Loading commit data...
bwt_map.cpp Loading commit data...
bwt_map.h Loading commit data...
codons.cpp Loading commit data...
codons.h Loading commit data...
common.cpp Loading commit data...
common.h Loading commit data...
contig_to_chr_coords Loading commit data...
coverage.cpp Loading commit data...
coverage.h Loading commit data...
deletions.cpp Loading commit data...
deletions.h Loading commit data...
fix_map_ordering.cpp Loading commit data...
fragments.cpp Loading commit data...
fragments.h Loading commit data...
fusions.cpp Loading commit data...
fusions.h Loading commit data...
gdna.cpp Loading commit data...
gdna.h Loading commit data...
gff.cpp Loading commit data...
gff.h Loading commit data...
gtf_juncs.cpp Loading commit data...
insertions.cpp Loading commit data...
insertions.h Loading commit data...
inserts.cpp Loading commit data...
inserts.h Loading commit data...
juncs_db.cpp Loading commit data...
junctions.cpp Loading commit data...
junctions.h Loading commit data...
long_spanning_reads.cpp Loading commit data...
map2gtf.cpp Loading commit data...
map2gtf.h Loading commit data...
prep_reads.cpp Loading commit data...
qual.cpp Loading commit data...
qual.h Loading commit data...
reads.cpp Loading commit data...
reads.h Loading commit data...
sam_juncs.cpp Loading commit data...
segment_juncs.cpp Loading commit data...
segments.h Loading commit data...
sra_to_solid Loading commit data...
timer.h Loading commit data...
tokenize.cpp Loading commit data...
tokenize.h Loading commit data...
tophat-fusion-post Loading commit data...
tophat.py Loading commit data...
tophat2.sh Loading commit data...
tophat_reports.cpp Loading commit data...
utils.cpp Loading commit data...
utils.h Loading commit data...
wiggles.h Loading commit data...