debian/changelog

+trinityrnaseq (2.6.6+dfsg-2) unstable; urgency=medium
+
+  * debian/trinityrnaseq.install: Add BubbleUpClustering binary
+
+ -- Michael R. Crusoe <michael.crusoe@gmail.com>  Mon, 31 Dec 2018 15:30:16 -0800
+
 trinityrnaseq (2.6.6+dfsg-1) unstable; urgency=medium
 
   * Team upload.

debian/clean

+Butterfly/src/sample_data/c1.graph.allProbPaths.fasta

debian/control

@@ -17,7 +17,7 @@ Build-Depends: debhelper (>= 11~),
                jellyfish,
                salmon,
                zlib1g-dev
-Standards-Version: 4.2.1
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/trinityrnaseq
 Vcs-Git: https://salsa.debian.org/med-team/trinityrnaseq.git
 Homepage: http://trinityrnaseq.github.io/

debian/trinityrnaseq.install

@@ -3,6 +3,7 @@ Analysis /usr/lib/trinityrnaseq/
 trinity-plugins/slclust/bin/slclust /usr/lib/trinityrnaseq/trinity-plugins/slclust/bin/
 trinity-plugins/scaffold_iworm_contigs/scaffold_iworm_contigs /usr/lib/trinityrnaseq/trinity-plugins/scaffold_iworm_contigs/
 trinity-plugins/seqtk-trinity-0.0.2/seqtk-trinity /usr/lib/trinityrnaseq/trinity-plugins/BIN/
+Chrysalis/BubbleUpClustering /usr/lib/trinityrnaseq/Chrysalis/
 Chrysalis/TranscriptomeFromVaryK /usr/lib/trinityrnaseq/Chrysalis/
 Chrysalis/RunButterfly /usr/lib/trinityrnaseq/Chrysalis/
 Chrysalis/ReadsToTranscripts_MPI_chang /usr/lib/trinityrnaseq/Chrysalis/