Loading README.md +14 −14 Original line number Diff line number Diff line Loading @@ -6,21 +6,10 @@ *** ## Availability The latest pre-release, developers-only linux binaries can be installed via [bioconda](https://bioconda.github.io/). Latest `ccs` can be installed via bioconda package `pbccs`. conda install pbccs These binaries are not ISO compliant. For research only. Not for use in diagnostics procedures. Official support is only provided for official and stable [SMRT Analysis builds](http://www.pacb.com/products-and-services/analytical-software/) provided by PacBio. No support for source builds. No support via mail to developers. Binaries on bioconda are newer than GitHub source code. Please refer to our [official pbbioconda page](https://github.com/PacificBiosciences/pbbioconda) for information on Installation, Support, License, Copyright, and Disclaimer. ## [Circular Consensus Calling](doc/PBCCS.md) Loading Loading @@ -51,6 +40,17 @@ and place them in a subdirectory of `${SMRT_CHEMISTRY_BUNDLE_DIR}`: This will cause Unanimity to try to load models from all files in `${SMRT_CHEMISTRY_BUNDLE_DIR}/arrow` with a `.json` suffix. ## Changelog * **3.3.0**: * Add a windowing approach to reduce computational complexity from quadratic to linear * Improve multi-threading framework to increase throughput * Enhance XML output, propagate `CollectionMetadata` * Includes latest chemistry parameters * 3.1.0: * Add `--maxPoaCoverage` to decrease runtime for unpolished output, special parameter for IsoSeq workflow * Chemistry parameters for SMRT Link v6.0 ## License [PacBio open source license](LICENSE) Loading Loading
README.md +14 −14 Original line number Diff line number Diff line Loading @@ -6,21 +6,10 @@ *** ## Availability The latest pre-release, developers-only linux binaries can be installed via [bioconda](https://bioconda.github.io/). Latest `ccs` can be installed via bioconda package `pbccs`. conda install pbccs These binaries are not ISO compliant. For research only. Not for use in diagnostics procedures. Official support is only provided for official and stable [SMRT Analysis builds](http://www.pacb.com/products-and-services/analytical-software/) provided by PacBio. No support for source builds. No support via mail to developers. Binaries on bioconda are newer than GitHub source code. Please refer to our [official pbbioconda page](https://github.com/PacificBiosciences/pbbioconda) for information on Installation, Support, License, Copyright, and Disclaimer. ## [Circular Consensus Calling](doc/PBCCS.md) Loading Loading @@ -51,6 +40,17 @@ and place them in a subdirectory of `${SMRT_CHEMISTRY_BUNDLE_DIR}`: This will cause Unanimity to try to load models from all files in `${SMRT_CHEMISTRY_BUNDLE_DIR}/arrow` with a `.json` suffix. ## Changelog * **3.3.0**: * Add a windowing approach to reduce computational complexity from quadratic to linear * Improve multi-threading framework to increase throughput * Enhance XML output, propagate `CollectionMetadata` * Includes latest chemistry parameters * 3.1.0: * Add `--maxPoaCoverage` to decrease runtime for unpolished output, special parameter for IsoSeq workflow * Chemistry parameters for SMRT Link v6.0 ## License [PacBio open source license](LICENSE) Loading
