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Commits on Source 6

......@@ -6,21 +6,10 @@
***
## Availability
The latest pre-release, developers-only linux binaries can be installed via [bioconda](https://bioconda.github.io/).
Latest `ccs` can be installed via bioconda package `pbccs`.
conda install pbccs
These binaries are not ISO compliant.
For research only.
Not for use in diagnostics procedures.
Official support is only provided for official and stable
[SMRT Analysis builds](http://www.pacb.com/products-and-services/analytical-software/)
provided by PacBio.
No support for source builds.
No support via mail to developers.
Binaries on bioconda are newer than GitHub source code.
Please refer to our [official pbbioconda page](https://github.com/PacificBiosciences/pbbioconda)
for information on Installation, Support, License, Copyright, and Disclaimer.
## [Circular Consensus Calling](doc/PBCCS.md)
......@@ -51,6 +40,17 @@ and place them in a subdirectory of `${SMRT_CHEMISTRY_BUNDLE_DIR}`:
This will cause Unanimity to try to load models from all files in `${SMRT_CHEMISTRY_BUNDLE_DIR}/arrow`
with a `.json` suffix.
## Changelog
* **3.3.0**:
* Add a windowing approach to reduce computational complexity from quadratic to linear
* Improve multi-threading framework to increase throughput
* Enhance XML output, propagate `CollectionMetadata`
* Includes latest chemistry parameters
* 3.1.0:
* Add `--maxPoaCoverage` to decrease runtime for unpolished output, special parameter for IsoSeq workflow
* Chemistry parameters for SMRT Link v6.0
## License
[PacBio open source license](LICENSE)
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unanimity (3.3.0+dfsg-1) unstable; urgency=medium
* New upstream version
* debhelper 12
* Standards-Version: 4.3.0
-- Andreas Tille <tille@debian.org> Thu, 24 Jan 2019 11:40:05 +0100
unanimity (3.1.0+dfsg-1) unstable; urgency=medium
* Initial release (Closes: #847310)
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......@@ -5,7 +5,7 @@ Uploaders: Afif Elghraoui <afif@debian.org>,
Section: science
Testsuite: autopkgtest-pkg-python
Priority: optional
Build-Depends: debhelper (>= 11~),
Build-Depends: debhelper (>= 12~),
dh-python,
cmake,
swig,
......@@ -18,7 +18,7 @@ Build-Depends: debhelper (>= 11~),
libpbcopper-dev,
libseqan2-dev,
pandoc
Standards-Version: 4.2.1
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/unanimity
Vcs-Git: https://salsa.debian.org/med-team/unanimity.git
Homepage: https://github.com/PacificBiosciences/unanimity
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