Skip to content
GitLab
Explore
Sign in
Register
Commits on Source (7)
Refresh patches
· 431d2874
Andreas Tille
authored
Aug 03, 2018
431d2874
Remove unneeded get-orig-source target
· 57b74617
Andreas Tille
authored
Aug 03, 2018
57b74617
Fix interpreter line in Perl scripts
· b363e324
Andreas Tille
authored
Aug 03, 2018
b363e324
Part of the patch was lost in previous commit - restore
· ca03f390
Andreas Tille
authored
Aug 03, 2018
ca03f390
Fix perl interpreter path
· d9917b2f
Andreas Tille
authored
Aug 03, 2018
d9917b2f
Fix path also in examples
· 0a37831b
Andreas Tille
authored
Aug 03, 2018
0a37831b
Upload to unstable
· 77a9019a
Andreas Tille
authored
Aug 03, 2018
77a9019a
Show whitespace changes
Inline
Side-by-side
debian/changelog
View file @
77a9019a
vcftools (0.1.16-1)
UNRELEASED
; urgency=medium
vcftools (0.1.16-1)
unstable
; urgency=medium
* New upstream version dealing with CVE-2018-11099, CVE-2018-11129 and
CVE-2018-11130
Closes: #902190
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Remove unneeded get-orig-source target
* Fix interpreter line in Perl scripts
-- Andreas Tille <tille@debian.org> Fri, 03 Aug 2018 1
5:56:18
+0200
-- Andreas Tille <tille@debian.org> Fri, 03 Aug 2018 1
6:20:50
+0200
vcftools (0.1.15-1) unstable; urgency=medium
...
...
debian/patches/manpage.patch
View file @
77a9019a
...
...
@@ -6,10 +6,10 @@ Description: Fix manpage syntax
+++ b/src/cpp/vcftools.1
@@ -1,7 +1,7 @@
.\" Manpage for vcftools.
-.TH vcftools man page 1 "
05 January
201
6
" "0.1.1
4
" "vcftools man page"
+.TH
VCFTOOLS "1" "05 January
201
7
" "0.1.1
5
" "vcftools man page"
-.TH vcftools man page 1 "
2 August
201
8
" "0.1.1
6
" "vcftools man page"
+.TH
vcftools "1" "2 August
201
8
" "0.1.1
6
" "vcftools man page"
.SH NAME
-vcftools v0.1.1
4
\- Utilities for the variant call format (VCF) and binary variant call format (BCF)
-vcftools v0.1.1
6
\- Utilities for the variant call format (VCF) and binary variant call format (BCF)
+vcftools \- Utilities for the variant call format (VCF) and binary variant call format (BCF)
.SH SYNOPSIS
.B vcftools
...
...
debian/rules
View file @
77a9019a
...
...
@@ -16,13 +16,15 @@ sampledir:=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)/examples
override_dh_auto_configure
:
dh_auto_configure
--
--with-pmdir
=
/share/perl5
override_dh_install
:
dh_install
for
perlscript
in
`
grep
-l
'#!/usr/bin/env \+perl'
debian/
*
/usr/bin/
*
`
;
do
\
sed
-i
'1s+#!/usr/bin/env perl+#!/usr/bin/perl+'
$${
perlscript
}
;
\
done
override_dh_installchangelogs
:
dh_installchangelogs src/perl/ChangeLog
get-orig-source
:
mkdir
-p
../tarballs
uscan
--verbose
--force-download
--repack
--compression
xz
--destdir
=
../tarballs
--no-symlink
override_dh_installexamples
:
dh_installexamples
;
mkdir
-p
$(
sampledir
)
/testsuite
;
...
...
@@ -32,3 +34,6 @@ override_dh_installexamples:
sed
-i
's#examples#testdata#g'
$(
sampledir
)
/testsuite/test.t
;
sed
-i
's#I\.\./perl/#I\.\./\.#g'
$(
sampledir
)
/testsuite/test.t
;
sed
-i
's#\.\./perl/#/usr/bin/#g'
$(
sampledir
)
/testsuite/test.t
;
for
perlscript
in
`
grep
-lR
'#!/usr/bin/env \+perl'
debian/
*
/usr/share/doc/vcftools/examples
`
;
do
\
sed
-i
'1s+#!/usr/bin/env perl+#!/usr/bin/perl+'
$${
perlscript
}
;
\
done