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Commits on Source (7)
vcftools (0.1.16-1) UNRELEASED; urgency=medium
vcftools (0.1.16-1) unstable; urgency=medium
* New upstream version dealing with CVE-2018-11099, CVE-2018-11129 and
CVE-2018-11130
Closes: #902190
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Remove unneeded get-orig-source target
* Fix interpreter line in Perl scripts
-- Andreas Tille <tille@debian.org> Fri, 03 Aug 2018 15:56:18 +0200
-- Andreas Tille <tille@debian.org> Fri, 03 Aug 2018 16:20:50 +0200
vcftools (0.1.15-1) unstable; urgency=medium
......
......@@ -6,10 +6,10 @@ Description: Fix manpage syntax
+++ b/src/cpp/vcftools.1
@@ -1,7 +1,7 @@
.\" Manpage for vcftools.
-.TH vcftools man page 1 "05 January 2016" "0.1.14" "vcftools man page"
+.TH VCFTOOLS "1" "05 January 2017" "0.1.15" "vcftools man page"
-.TH vcftools man page 1 "2 August 2018" "0.1.16" "vcftools man page"
+.TH vcftools "1" "2 August 2018" "0.1.16" "vcftools man page"
.SH NAME
-vcftools v0.1.14 \- Utilities for the variant call format (VCF) and binary variant call format (BCF)
-vcftools v0.1.16 \- Utilities for the variant call format (VCF) and binary variant call format (BCF)
+vcftools \- Utilities for the variant call format (VCF) and binary variant call format (BCF)
.SH SYNOPSIS
.B vcftools
......
......@@ -16,13 +16,15 @@ sampledir:=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)/examples
override_dh_auto_configure:
dh_auto_configure -- --with-pmdir=/share/perl5
override_dh_install:
dh_install
for perlscript in `grep -l '#!/usr/bin/env \+perl' debian/*/usr/bin/*` ; do \
sed -i '1s+#!/usr/bin/env perl+#!/usr/bin/perl+' $${perlscript} ; \
done
override_dh_installchangelogs:
dh_installchangelogs src/perl/ChangeLog
get-orig-source:
mkdir -p ../tarballs
uscan --verbose --force-download --repack --compression xz --destdir=../tarballs --no-symlink
override_dh_installexamples:
dh_installexamples;
mkdir -p $(sampledir)/testsuite;
......@@ -32,3 +34,6 @@ override_dh_installexamples:
sed -i 's#examples#testdata#g' $(sampledir)/testsuite/test.t;
sed -i 's#I\.\./perl/#I\.\./\.#g' $(sampledir)/testsuite/test.t;
sed -i 's#\.\./perl/#/usr/bin/#g' $(sampledir)/testsuite/test.t;
for perlscript in `grep -lR '#!/usr/bin/env \+perl' debian/*/usr/share/doc/vcftools/examples` ; do \
sed -i '1s+#!/usr/bin/env perl+#!/usr/bin/perl+' $${perlscript} ; \
done