Commit 252afda1 authored by Andreas Tille's avatar Andreas Tille
Browse files

Needs cgecore

parent df3b87fe

debian/changelog

+1 −0
Original line number Diff line number Diff line 
virulencefinder (0.0+git20190402.4812325-1) UNRELEASED; urgency=medium



  * Initial release (Closes: #<bug>)

  TODO: https://pypi.org/project/cgecore/



 -- Andreas Tille <tille@debian.org>  Fri, 24 May 2019 14:36:44 +0200

debian/rules

+2 −2
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@@ -9,7 +9,7 @@ export PYBUILD_CLEAN_ARGS=rm -rf test/results_tab.tsv 
	dh $@ --with python3 --buildsystem=pybuild



override_dh_auto_test:

#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))

ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))

	./virulencefinder.py -i test/test.fsa -o test/ -mp blastn -x -q ; \

	file=test/results_tab.tsv ; \

	DIFF=$$(diff $file test/test_results.tsv) ; \
@@ -18,4 +18,4 @@ override_dh_auto_test: 
	else \

	   echo "TEST FAILED"; \

	fi

#endif
 
endif