Debian packaging of the WHAM sequence aligner

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debian Loading commit data...
reads Loading commit data...
sequences Loading commit data...
COPYING Loading commit data...
MANUAL Loading commit data...
VERSION Loading commit data...
aligner.cpp Loading commit data...
aligner.h Loading commit data...
bitread.h Loading commit data...
builder.cpp Loading commit data...
edit_distance.cpp Loading commit data...
edit_distance.h Loading commit data...
embedhash.cpp Loading commit data...
embedhash.h Loading commit data...
error.cpp Loading commit data...
error.h Loading commit data...
hash.cpp Loading commit data...
hash.h Loading commit data...
hitset.cpp Loading commit data...
hitset.h Loading commit data...
interval.cpp Loading commit data...
interval.h Loading commit data...
lib.h Loading commit data...
main.cpp Loading commit data...
makefile Loading commit data...
model.cpp Loading commit data...
model.h Loading commit data...
pair.h Loading commit data...
perfcounters.cpp Loading commit data...
perfcounters.h Loading commit data...
rdtsc.h Loading commit data...
sequence.cpp Loading commit data...
sequence.h Loading commit data...
short.cpp Loading commit data...
short.h Loading commit data...
sorter.cpp Loading commit data...
unittest.cpp Loading commit data...
util.h Loading commit data...
writer.cpp Loading commit data...
writer.h Loading commit data...