Commit 941c9735 authored by Dylan Aïssi's avatar Dylan Aïssi

New upstream version 1.26.0+dfsg

parent 79ef9c2f
Package: phyloseq
Version: 1.24.2
Version: 1.26.0
Date: 2018-07-15
Title: Handling and analysis of high-throughput microbiome census data
Description: phyloseq provides a set of classes and tools
......@@ -38,9 +38,9 @@ Collate: 'allClasses.R' 'allPackage.R' 'allData.R' 'as-methods.R'
'extend_metagenomeSeq.R'
RoxygenNote: 6.0.1
git_url: https://git.bioconductor.org/packages/phyloseq
git_branch: RELEASE_3_7
git_last_commit: 829992f
git_last_commit_date: 2018-07-15
Date/Publication: 2018-07-15
git_branch: RELEASE_3_8
git_last_commit: 5780b26
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: no
Packaged: 2018-07-15 23:30:27 UTC; biocbuild
Packaged: 2018-10-30 23:34:21 UTC; biocbuild
......@@ -13,15 +13,16 @@ install_phyloseq = function(branch = "release",
if(verbose){
message("Installing the release version from BioC")
}
source("http://bioconductor.org/biocLite.R")
biocLite("phyloseq", suppressUpdates=TRUE)
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("phyloseq", suppressUpdates=TRUE)
return("phyloseq installed from BioC release branch (if no errors).")
}
if(branch == "devel"){
if(verbose){
message("\n\nInstalling phyloseq from the devel version from BioC...\n")
}
biocLite("phyloseq",
BiocManager::install("phyloseq",
siteRepos="http://bioconductor.org/packages/devel/bioc",
suppressUpdates=TRUE,
type="source")
......
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