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DPCoA.Rd Loading commit data...
JSD.Rd Loading commit data...
UniFrac-methods.Rd Loading commit data...
access.Rd Loading commit data...
assign-otu_table.Rd Loading commit data...
assign-phy_tree.Rd Loading commit data...
assign-sample_data.Rd Loading commit data...
assign-sample_names.Rd Loading commit data...
assign-tax_table.Rd Loading commit data...
assign-taxa_are_rows.Rd Loading commit data...
assign-taxa_names.Rd Loading commit data...
build_tax_table.Rd Loading commit data...
capscale-phyloseq-methods.Rd Loading commit data...
cca-rda-phyloseq-methods.Rd Loading commit data...
chunkReOrder.Rd Loading commit data...
data-GlobalPatterns.Rd Loading commit data...
data-enterotype.Rd Loading commit data...
data-esophagus.Rd Loading commit data...
data-soilrep.Rd Loading commit data...
decorana.Rd Loading commit data...
dist-class.Rd Loading commit data...
distance.Rd Loading commit data...
distanceMethodList.Rd Loading commit data...
envHash2otu_table.Rd Loading commit data...
estimate_richness.Rd Loading commit data...
export_env_file.Rd Loading commit data...
export_mothur_dist.Rd Loading commit data...
extract-methods.Rd Loading commit data...
filter_taxa.Rd Loading commit data...
filterfun_sample.Rd Loading commit data...
fix_phylo.Rd Loading commit data...
gapstat_ord.Rd Loading commit data...
genefilter_sample-methods.Rd Loading commit data...
get.component.classes.Rd Loading commit data...
get_sample-methods.Rd Loading commit data...
get_taxa-methods.Rd Loading commit data...
get_taxa_unique.Rd Loading commit data...
get_variable.Rd Loading commit data...
getslots.phyloseq.Rd Loading commit data...
import.Rd Loading commit data...
import_RDP_cluster.Rd Loading commit data...
import_RDP_otu.Rd Loading commit data...
import_biom.Rd Loading commit data...
import_env_file.Rd Loading commit data...
import_mothur.Rd Loading commit data...
import_mothur_constaxonomy.Rd Loading commit data...
import_mothur_dist.Rd Loading commit data...
import_mothur_groups.Rd Loading commit data...
import_mothur_otu_table.Rd Loading commit data...
import_mothur_otulist.Rd Loading commit data...
import_mothur_shared.Rd Loading commit data...
import_pyrotagger_tab.Rd Loading commit data...
import_qiime.Rd Loading commit data...
import_qiime_otu_tax.Rd Loading commit data...
import_qiime_sample_data.Rd Loading commit data...
import_uparse.Rd Loading commit data...
import_usearch_uc.Rd Loading commit data...
index_reorder.Rd Loading commit data...
intersect_taxa.Rd Loading commit data...
make_network.Rd Loading commit data...
merge_phyloseq.Rd Loading commit data...
merge_phyloseq_pair-methods.Rd Loading commit data...
merge_samples-methods.Rd Loading commit data...
merge_taxa-methods.Rd Loading commit data...
metaMDS.Rd Loading commit data...
microbio_me_qiime.Rd Loading commit data...
mt-methods.Rd Loading commit data...
nodeplotblank.Rd Loading commit data...
nodeplotboot.Rd Loading commit data...
nodeplotdefault.Rd Loading commit data...
nsamples-methods.Rd Loading commit data...
ntaxa-methods.Rd Loading commit data...
ordinate.Rd Loading commit data...
otu_table-class.Rd Loading commit data...
otu_table-methods.Rd Loading commit data...
parseTaxonomy-functions.Rd Loading commit data...
pcoa.Rd Loading commit data...
phy_tree-methods.Rd Loading commit data...
phylo-class.Rd Loading commit data...
phylo.Rd Loading commit data...
phyloseq-class.Rd Loading commit data...
phyloseq-deprecated.Rd Loading commit data...
phyloseq-package.Rd Loading commit data...
phyloseq.Rd Loading commit data...
phyloseq_to_deseq2.Rd Loading commit data...
phyloseq_to_metagenomeSeq.Rd Loading commit data...
plot_bar.Rd Loading commit data...
plot_clusgap.Rd Loading commit data...
plot_heatmap.Rd Loading commit data...
plot_net.Rd Loading commit data...
plot_network.Rd Loading commit data...
plot_ordination.Rd Loading commit data...
plot_phyloseq-methods.Rd Loading commit data...
plot_richness.Rd Loading commit data...
plot_scree.Rd Loading commit data...
plot_tree.Rd Loading commit data...
prune_samples-methods.Rd Loading commit data...
prune_taxa-methods.Rd Loading commit data...
psmelt.Rd Loading commit data...
rank_names.Rd Loading commit data...
rarefy_even_depth.Rd Loading commit data...
read_tree.Rd Loading commit data...
read_tree_greengenes.Rd Loading commit data...
reconcile_categories.Rd Loading commit data...
refseq-methods.Rd Loading commit data...
rm_outlierf.Rd Loading commit data...
sample_data-class.Rd Loading commit data...
sample_data-methods.Rd Loading commit data...
sample_names-methods.Rd Loading commit data...
sample_sums.Rd Loading commit data...
sample_variables.Rd Loading commit data...
show-methods.Rd Loading commit data...
show_mothur_cutoffs.Rd Loading commit data...
splat.phyloseq.objects.Rd Loading commit data...
subset_ord_plot.Rd Loading commit data...
subset_samples-methods.Rd Loading commit data...
subset_taxa-methods.Rd Loading commit data...
tax_glom.Rd Loading commit data...
tax_table-methods.Rd Loading commit data...
taxa_are_rows-methods.Rd Loading commit data...
taxa_names-methods.Rd Loading commit data...
taxa_sums.Rd Loading commit data...
taxonomyTable-class.Rd Loading commit data...
threshrank.Rd Loading commit data...
threshrankfun.Rd Loading commit data...
tip_glom.Rd Loading commit data...
topf.Rd Loading commit data...
topk.Rd Loading commit data...
topp.Rd Loading commit data...
transformcounts.Rd Loading commit data...
transpose-methods.Rd Loading commit data...
tree_layout.Rd Loading commit data...