New upstream version 1.0
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- CHANGELOG 5 additions, 0 deletionsCHANGELOG
- docs/MANUAL.html 59 additions, 57 deletionsdocs/MANUAL.html
- docs/MANUAL.markdown 33 additions, 27 deletionsdocs/MANUAL.markdown
- docs/top.html 1 addition, 1 deletiondocs/top.html
- install_kraken.sh 5 additions, 2 deletionsinstall_kraken.sh
- scripts/add_to_library.sh 23 additions, 11 deletionsscripts/add_to_library.sh
- scripts/build_kraken_db.sh 28 additions, 21 deletionsscripts/build_kraken_db.sh
- scripts/convert_gb_to_fa.pl 58 additions, 0 deletionsscripts/convert_gb_to_fa.pl
- scripts/cp_into_tempfile.pl 1 addition, 1 deletionscripts/cp_into_tempfile.pl
- scripts/download_genomic_library.sh 42 additions, 78 deletionsscripts/download_genomic_library.sh
- scripts/download_taxonomy.sh 18 additions, 28 deletionsscripts/download_taxonomy.sh
- scripts/kraken 1 addition, 1 deletionscripts/kraken
- scripts/kraken-build 5 additions, 5 deletionsscripts/kraken-build
- scripts/kraken-filter 1 addition, 1 deletionscripts/kraken-filter
- scripts/kraken-mpa-report 1 addition, 1 deletionscripts/kraken-mpa-report
- scripts/kraken-report 7 additions, 2 deletionsscripts/kraken-report
- scripts/kraken-translate 1 addition, 1 deletionscripts/kraken-translate
- scripts/krakenlib.pm 28 additions, 1 deletionscripts/krakenlib.pm
- scripts/lookup_accession_numbers.pl 65 additions, 0 deletionsscripts/lookup_accession_numbers.pl
- scripts/read_merger.pl 1 addition, 1 deletionscripts/read_merger.pl
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