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  • 0.14.0-rc1
    ac1412ff · enh: test travis wheel deployment ·
  • debian/0.13.1-1
    a979080e · upish_setuppy_install_files to overcome problem on jessie and nd16.04 · 
    nipype Debian release 0.13.1-1
    Unverified
  • 0.13.1
    8946bcab · Merge pull request #2017 from satra/fix/configparser · 
    0.13.1 (May 20, 2017)
=====================

* FIX: Make release compatible with conda-forge build process (https://github.com/nipy/nipype/pull/2017)
* ENH: Update some minimum versions in compliance with Debian Jessie (https://github.com/nipy/nipype/pull/2017)
* ENH: Circle builds use cached docker layers (https://github.com/nipy/nipype/pull/2017)
* ENH: Base docker to use FS6 and ANTS 2.2.0 (https://github.com/nipy/nipype/pull/2024)
* FIX: Mailmap and contributor acknowledgment (https://github.com/nipy/nipype/pull/2017)
* FIX: Preserve node properties in sub nodes of MapNode (https://github.com/nipy/nipype/pull/2019)
* FIX: Fix interfaces 3DUnifize, ICA_AROMA, BinaryMaths, RegAverage, BBRegister,
  AffineInitializer (https://github.com/nipy/nipype/pull/2025, https://github.com/nipy/nipype/pull/2027,
  https://github.com/nipy/nipype/pull/2036, https://github.com/nipy/nipype/pull/2037,
  https://github.com/nipy/nipype/pull/2031, https://github.com/nipy/nipype/pull/2010)
* ENH: Add Anisotropic Power interface (https://github.com/nipy/nipype/pull/2039)
* FIX: Bayesian estimation in SPM (https://github.com/nipy/nipype/pull/2030)

0.13.0 (May 11, 2017)
=====================

* ENH: Multi-stage recon-all directives (https://github.com/nipy/nipype/pull/1991)
* FIX: FEAT "folder does not exist" error (https://github.com/nipy/nipype/pull/2000)
* ENH: Niftyfit interfaces (https://github.com/nipy/nipype/pull/1910)
* FIX: Define ANTSPATH for BrainExtraction automatically (https://github.com/nipy/nipype/pull/1986)
* ENH: New trait for imaging files (https://github.com/nipy/nipype/pull/1949)
* ENH: Niftyseg interfaces (https://github.com/nipy/nipype/pull/1911)
* ENH: Niftyreg interfaces (https://github.com/nipy/nipype/pull/1913)
* MRG: Allow more support for CLI (https://github.com/nipy/nipype/pull/1908)
* ENH: 3dQwarpPlusMinus interface (https://github.com/nipy/nipype/pull/1974)
* FIX: PY3.6 support (https://github.com/nipy/nipype/pull/1977)
* FIX: PY3 and stream fixes for MRTrix2TrackVis (https://github.com/nipy/nipype/pull/1804)
* ENH: More mask options for CompCor interfaces (https://github.com/nipy/nipype/pull/1968 + https://github.com/nipy/nipype/pull/1992)
* ENH: Additional TOPUP outputs (https://github.com/nipy/nipype/pull/1976)
* ENH: Additional Eddy flags (https://github.com/nipy/nipype/pull/1967)
* ENH: ReconAll handlers for less common cases (https://github.com/nipy/nipype/pull/1966)
* ENH: FreeSurferSource now finds graymid/midthickness surfs (https://github.com/nipy/nipype/pull/1972)
* ENH: Additional fslmaths dimensional reduction operations (https://github.com/nipy/nipype/pull/1956)
* ENH: More options for RobustFOV interface (https://github.com/nipy/nipype/pull/1923)
* ENH: Add MRIsCombine to FreeSurfer utils (https://github.com/nipy/nipype/pull/1948)
* FIX: Level1Design EV parameter substitution (https://github.com/nipy/nipype/pull/1953)
* FIX: Dcm2niix outputs can be uncompressed (https://github.com/nipy/nipype/pull/1951)
* FIX: Ensure build fails in Circle when tests fail (https://github.com/nipy/nipype/pull/1981)
* ENH: Add interface to antsAffineInitializer (https://github.com/nipy/nipype/pull/1980)
* ENH: AFNI motion parameter support for FrameWiseDisplacement (https://github.com/nipy/nipype/pull/1840)
* ENH: Add ANTs KellyKapowski interface (https://github.com/nipy/nipype/pull/1845)
* FIX: AFNI interface bug setting OMP_NUM_THREADS to 1 (https://github.com/nipy/nipype/pull/1728)
* FIX: Select Eddy run command at runtime (https://github.com/nipy/nipype/pull/1871)
* FIX: Increase FLIRT's flexibility with apply_xfm (https://github.com/nipy/nipype/pull/1875)
* DOC: Update FSL preprocess docstrings (https://github.com/nipy/nipype/pull/1881)
* ENH: Support GIFTI outputs in SampleToSurface (https://github.com/nipy/nipype/pull/1886)
* FIX: Configparser differences between PY2 and PY3 (https://github.com/nipy/nipype/pull/1890)
* ENH: Add mris_expand interface (https://github.com/nipy/nipype/pull/1893)
* FIX: Split over-eager globs in FreeSurferSource (https://github.com/nipy/nipype/pull/1894)
* FIX: Store undefined by default so that xor checks don't trip (https://github.com/nipy/nipype/pull/1903)
* FIX: Gantt chart generator PY3 compatibility (https://github.com/nipy/nipype/pull/1907)
* FIX: Add DOF and --fsl-dof options to BBRegister (https://github.com/nipy/nipype/pull/1917)
* ENH: Auto-derive input_names in Function (https://github.com/nipy/nipype/pull/1918)
* FIX: Minor fixes for NonSteadyStateDetector (https://github.com/nipy/nipype/pull/1926)
* DOC: Add duecredit references for AFNI and FSL (https://github.com/nipy/nipype/pull/1930)
* ENH: Added zenodo (https://zenodo.org/) file (https://github.com/nipy/nipype/pull/1924)
* ENH: Disable symlinks on CIFS filesystems (https://github.com/nipy/nipype/pull/1941)
* ENH: Sphinx extension to plot workflows (https://github.com/nipy/nipype/pull/1896)
* ENH: Added non-steady state detector for EPI data (https://github.com/nipy/nipype/pull/1839)
* ENH: Enable new BBRegister init options for FSv6+ (https://github.com/nipy/nipype/pull/1811)
* REF: Splits nipype.interfaces.utility into base, csv, and wrappers (https://github.com/nipy/nipype/pull/1828)
* FIX: Makespec now runs with nipype in current directory (https://github.com/nipy/nipype/pull/1813)
* FIX: Flexible nifti opening with mmap if Numpy < 1.12.0 (https://github.com/nipy/nipype/pull/1796 + https://github.com/nipy/nipype/pull/1831)
* ENH: DVARS includes intensity normalization feature - turned on by default (https://github.com/nipy/nipype/pull/1827)
* FIX: DVARS is correctly using sum of squares instead of standard deviation (https://github.com/nipy/nipype/pull/1827)
* ENH: Refactoring of nipype.interfaces.utility (https://github.com/nipy/nipype/pull/1828)
* FIX: CircleCI were failing silently. Some fixes to tests (https://github.com/nipy/nipype/pull/1833)
* FIX: Issues in Docker image permissions, and docker documentation (https://github.com/nipy/nipype/pull/1825)
* ENH: Revised all Dockerfiles and automated deployment to Docker Hub
       from CircleCI (https://github.com/nipy/nipype/pull/1815)
* ENH: Update ReconAll interface for FreeSurfer v6.0.0 (https://github.com/nipy/nipype/pull/1790)
* FIX: Cast DVARS float outputs to avoid memmap error (https://github.com/nipy/nipype/pull/1777)
* FIX: FSL FNIRT intensity mapping files (https://github.com/nipy/nipype/pull/1799)
* ENH: Additional outputs generated by FSL EDDY (https://github.com/nipy/nipype/pull/1793)
* TST: Parallelize CircleCI build across 4 containers (https://github.com/nipy/nipype/pull/1769)

0.13.0-rc1 (January 4, 2017)
============================

* FIX: Compatibility with traits 4.6 (https://github.com/nipy/nipype/pull/1770)
* FIX: Multiproc deadlock (https://github.com/nipy/nipype/pull/1756)
* TST: Replace nose and unittest with pytest (https://github.com/nipy/nipype/pull/1722, https://github.com/nipy/nipype/pull/1751)
* FIX: Semaphore capture using MultiProc plugin (https://github.com/nipy/nipype/pull/1689)
* REF: Refactor AFNI interfaces (https://github.com/nipy/nipype/pull/1678, https://github.com/nipy/nipype/pull/1680)
* ENH: Move nipype commands to group command using click (https://github.com/nipy/nipype/pull/1608)
* FIX: AFNI Retroicor interface fixes (https://github.com/nipy/nipype/pull/1669)
* FIX: Minor errors after migration to setuptools (https://github.com/nipy/nipype/pull/1671)
* ENH: Add AFNI 3dNote interface (https://github.com/nipy/nipype/pull/1637)
* ENH: Abandon distutils, only use setuptools (https://github.com/nipy/nipype/pull/1627)
* FIX: Minor bugfixes related to unicode literals (https://github.com/nipy/nipype/pull/1656)
* TST: Automatic retries in travis (https://github.com/nipy/nipype/pull/1659/files)
* ENH: Add signal extraction interface (https://github.com/nipy/nipype/pull/1647)
* ENH: Add a DVARS calculation interface (https://github.com/nipy/nipype/pull/1606)
* ENH: New interface to b0calc of FSL-POSSUM (https://github.com/nipy/nipype/pull/1399)
* ENH: Add CompCor (https://github.com/nipy/nipype/pull/1599)
* ENH: Add duecredit entries (https://github.com/nipy/nipype/pull/1466)
* FIX: Python 3 compatibility fixes (https://github.com/nipy/nipype/pull/1572)
* REF: Improved PEP8 compliance for fsl interfaces (https://github.com/nipy/nipype/pull/1597)
* REF: Improved PEP8 compliance for spm interfaces (https://github.com/nipy/nipype/pull/1593)
* TST: Replaced coveralls with codecov (https://github.com/nipy/nipype/pull/1609)
* ENH: More BrainSuite interfaces (https://github.com/nipy/nipype/pull/1554)
* ENH: Convenient load/save of interface inputs (https://github.com/nipy/nipype/pull/1591)
* ENH: Add a Framewise Displacement calculation interface (https://github.com/nipy/nipype/pull/1604)
* FIX: Use builtins open and unicode literals for py3 compatibility (https://github.com/nipy/nipype/pull/1572)
* TST: reduce the size of docker images & use tags for images (https://github.com/nipy/nipype/pull/1564)
* ENH: Implement missing inputs/outputs in FSL AvScale (https://github.com/nipy/nipype/pull/1563)
* FIX: Fix symlink test in copyfile (https://github.com/nipy/nipype/pull/1570, https://github.com/nipy/nipype/pull/1586)
* ENH: Added support for custom job submission check in SLURM (https://github.com/nipy/nipype/pull/1582)
* ENH: Added ANTs interface CreateJacobianDeterminantImage; replaces deprecated JacobianDeterminant
       (https://github.com/nipy/nipype/pull/1654)
  • 0.13.0
    fd5b81b7 · doc: fix rest styling · 
    Release 0.13.0 (May 11, 2017)
=============================

* ENH: Multi-stage recon-all directives (https://github.com/nipy/nipype/pull/1991)
* FIX: FEAT "folder does not exist" error (https://github.com/nipy/nipype/pull/2000)
* ENH: Niftyfit interfaces (https://github.com/nipy/nipype/pull/1910)
* FIX: Define ANTSPATH for BrainExtraction automatically (https://github.com/nipy/nipype/pull/1986)
* ENH: New trait for imaging files (https://github.com/nipy/nipype/pull/1949)
* ENH: Niftyseg interfaces (https://github.com/nipy/nipype/pull/1911)
* ENH: Niftyreg interfaces (https://github.com/nipy/nipype/pull/1913)
* MRG: Allow more support for CLI (https://github.com/nipy/nipype/pull/1908)
* ENH: 3dQwarpPlusMinus interface (https://github.com/nipy/nipype/pull/1974)
* FIX: PY3.6 support (https://github.com/nipy/nipype/pull/1977)
* FIX: PY3 and stream fixes for MRTrix2TrackVis (https://github.com/nipy/nipype/pull/1804)
* ENH: More mask options for CompCor interfaces (https://github.com/nipy/nipype/pull/1968 + https://github.com/nipy/nipype/pull/1992)
* ENH: Additional TOPUP outputs (https://github.com/nipy/nipype/pull/1976)
* ENH: Additional Eddy flags (https://github.com/nipy/nipype/pull/1967)
* ENH: ReconAll handlers for less common cases (https://github.com/nipy/nipype/pull/1966)
* ENH: FreeSurferSource now finds graymid/midthickness surfs (https://github.com/nipy/nipype/pull/1972)
* ENH: Additional fslmaths dimensional reduction operations (https://github.com/nipy/nipype/pull/1956)
* ENH: More options for RobustFOV interface (https://github.com/nipy/nipype/pull/1923)
* ENH: Add MRIsCombine to FreeSurfer utils (https://github.com/nipy/nipype/pull/1948)
* FIX: Level1Design EV parameter substitution (https://github.com/nipy/nipype/pull/1953)
* FIX: Dcm2niix outputs can be uncompressed (https://github.com/nipy/nipype/pull/1951)
* FIX: Ensure build fails in Circle when tests fail (https://github.com/nipy/nipype/pull/1981)
* ENH: Add interface to antsAffineInitializer (https://github.com/nipy/nipype/pull/1980)
* ENH: AFNI motion parameter support for FrameWiseDisplacement (https://github.com/nipy/nipype/pull/1840)
* ENH: Add ANTs KellyKapowski interface (https://github.com/nipy/nipype/pull/1845)
* FIX: AFNI interface bug setting OMP_NUM_THREADS to 1 (https://github.com/nipy/nipype/pull/1728)
* FIX: Select Eddy run command at runtime (https://github.com/nipy/nipype/pull/1871)
* FIX: Increase FLIRT's flexibility with apply_xfm (https://github.com/nipy/nipype/pull/1875)
* DOC: Update FSL preprocess docstrings (https://github.com/nipy/nipype/pull/1881)
* ENH: Support GIFTI outputs in SampleToSurface (https://github.com/nipy/nipype/pull/1886)
* FIX: Configparser differences between PY2 and PY3 (https://github.com/nipy/nipype/pull/1890)
* ENH: Add mris_expand interface (https://github.com/nipy/nipype/pull/1893)
* FIX: Split over-eager globs in FreeSurferSource (https://github.com/nipy/nipype/pull/1894)
* FIX: Store undefined by default so that xor checks don't trip (https://github.com/nipy/nipype/pull/1903)
* FIX: Gantt chart generator PY3 compatibility (https://github.com/nipy/nipype/pull/1907)
* FIX: Add DOF and --fsl-dof options to BBRegister (https://github.com/nipy/nipype/pull/1917)
* ENH: Auto-derive input_names in Function (https://github.com/nipy/nipype/pull/1918)
* FIX: Minor fixes for NonSteadyStateDetector (https://github.com/nipy/nipype/pull/1926)
* DOC: Add duecredit references for AFNI and FSL (https://github.com/nipy/nipype/pull/1930)
* ENH: Added zenodo (https://zenodo.org/) file (https://github.com/nipy/nipype/pull/1924)
* ENH: Disable symlinks on CIFS filesystems (https://github.com/nipy/nipype/pull/1941)
* ENH: Sphinx extension to plot workflows (https://github.com/nipy/nipype/pull/1896)
* ENH: Added non-steady state detector for EPI data (https://github.com/nipy/nipype/pull/1839)
* ENH: Enable new BBRegister init options for FSv6+ (https://github.com/nipy/nipype/pull/1811)
* REF: Splits nipype.interfaces.utility into base, csv, and wrappers (https://github.com/nipy/nipype/pull/1828)
* FIX: Makespec now runs with nipype in current directory (https://github.com/nipy/nipype/pull/1813)
* FIX: Flexible nifti opening with mmap if Numpy < 1.12.0 (https://github.com/nipy/nipype/pull/1796 + https://github.com/nipy/nipype/pull/1831)
* ENH: DVARS includes intensity normalization feature - turned on by default (https://github.com/nipy/nipype/pull/1827)
* FIX: DVARS is correctly using sum of squares instead of standard deviation (https://github.com/nipy/nipype/pull/1827)
* ENH: Refactoring of nipype.interfaces.utility (https://github.com/nipy/nipype/pull/1828)
* FIX: CircleCI were failing silently. Some fixes to tests (https://github.com/nipy/nipype/pull/1833)
* FIX: Issues in Docker image permissions, and docker documentation (https://github.com/nipy/nipype/pull/1825)
* ENH: Revised all Dockerfiles and automated deployment to Docker Hub
       from CircleCI (https://github.com/nipy/nipype/pull/1815)
* ENH: Update ReconAll interface for FreeSurfer v6.0.0 (https://github.com/nipy/nipype/pull/1790)
* FIX: Cast DVARS float outputs to avoid memmap error (https://github.com/nipy/nipype/pull/1777)
* FIX: FSL FNIRT intensity mapping files (https://github.com/nipy/nipype/pull/1799)
* ENH: Additional outputs generated by FSL EDDY (https://github.com/nipy/nipype/pull/1793)
* TST: Parallelize CircleCI build across 4 containers (https://github.com/nipy/nipype/pull/1769)
* FIX: Compatibility with traits 4.6 (https://github.com/nipy/nipype/pull/1770)
* FIX: Multiproc deadlock (https://github.com/nipy/nipype/pull/1756)
* TST: Replace nose and unittest with pytest (https://github.com/nipy/nipype/pull/1722, https://github.com/nipy/nipype/pull/1751)
* FIX: Semaphore capture using MultiProc plugin (https://github.com/nipy/nipype/pull/1689)
* REF: Refactor AFNI interfaces (https://github.com/nipy/nipype/pull/1678, https://github.com/nipy/nipype/pull/1680)
* ENH: Move nipype commands to group command using click (https://github.com/nipy/nipype/pull/1608)
* FIX: AFNI Retroicor interface fixes (https://github.com/nipy/nipype/pull/1669)
* FIX: Minor errors after migration to setuptools (https://github.com/nipy/nipype/pull/1671)
* ENH: Add AFNI 3dNote interface (https://github.com/nipy/nipype/pull/1637)
* ENH: Abandon distutils, only use setuptools (https://github.com/nipy/nipype/pull/1627)
* FIX: Minor bugfixes related to unicode literals (https://github.com/nipy/nipype/pull/1656)
* TST: Automatic retries in travis (https://github.com/nipy/nipype/pull/1659/files)
* ENH: Add signal extraction interface (https://github.com/nipy/nipype/pull/1647)
* ENH: Add a DVARS calculation interface (https://github.com/nipy/nipype/pull/1606)
* ENH: New interface to b0calc of FSL-POSSUM (https://github.com/nipy/nipype/pull/1399)
* ENH: Add CompCor (https://github.com/nipy/nipype/pull/1599)
* ENH: Add duecredit entries (https://github.com/nipy/nipype/pull/1466)
* FIX: Python 3 compatibility fixes (https://github.com/nipy/nipype/pull/1572)
* REF: Improved PEP8 compliance for fsl interfaces (https://github.com/nipy/nipype/pull/1597)
* REF: Improved PEP8 compliance for spm interfaces (https://github.com/nipy/nipype/pull/1593)
* TST: Replaced coveralls with codecov (https://github.com/nipy/nipype/pull/1609)
* ENH: More BrainSuite interfaces (https://github.com/nipy/nipype/pull/1554)
* ENH: Convenient load/save of interface inputs (https://github.com/nipy/nipype/pull/1591)
* ENH: Add a Framewise Displacement calculation interface (https://github.com/nipy/nipype/pull/1604)
* FIX: Use builtins open and unicode literals for py3 compatibility (https://github.com/nipy/nipype/pull/1572)
* TST: reduce the size of docker images & use tags for images (https://github.com/nipy/nipype/pull/1564)
* ENH: Implement missing inputs/outputs in FSL AvScale (https://github.com/nipy/nipype/pull/1563)
* FIX: Fix symlink test in copyfile (https://github.com/nipy/nipype/pull/1570, https://github.com/nipy/nipype/pull/1586)
* ENH: Added support for custom job submission check in SLURM (https://github.com/nipy/nipype/pull/1582)
* ENH: Added ANTs interface CreateJacobianDeterminantImage; replaces deprecated JacobianDeterminant
       (https://github.com/nipy/nipype/pull/1654)
  • 0.13.0-rc1
    4f08c9ab · Merge pull request #1772 from satra/rel/0.13.0-rc1 ·
  • debian/0.12.1+git4-gbc3a0b5-1
    742baf8d · run tests under build so no garbage pollutes debian/ dir · 
    nipype Debian release 0.12.1+git4-gbc3a0b5-1
    Unverified
  • debian/0.12.0+git53-g356319b-1
    4db7b388 · added patch changeset_bf-install-use-resources.diff to "cherry-pick"... · 
    nipype Debian release 0.12.0+git53-g356319b-1
    Unverified
  • 0.12.1
    a4d1e072 · Update CHANGES ·
  • 0.12.0
    6d8efd74 · Update requirements.txt ·
  • 0.12.0-rc2
    15a2beee · Merge pull request #1519 from satra/rel/0.12.0-rc2 ·
  • 0.12.0-rc1
    09e91c87 · Merge pull request #1449 from satra/rel/0.12rc1 ·
  • debian/0.11.0-1
    bb9b099f · needed to drop --with-doctest so that test_mesh_ops doesn't get imported anyhow · 
    nipype Debian release 0.11.0-1
    Unverified
  • 0.11.0
    f9c98baa · fix: version compilation ·
  • 0.11.0-rc1
    f5c206da · Update .travis.yml ·
  • debian/0.10.0-2
    7487d306 · Merge remote-tracking branch 'alioth/debian' into debian · 
    nipype Debian release 0.10.0-2
    Unverified
  • debian/0.10.0-1
    7609560d · changelog · 
    nipype Debian release 0.10.0-1
    Unverified
  • 0.10.0
    e63e0551 · 0.10.0 release · 
    release 0.10.0
  • debian/0.9.2+git593-g35c9f46-1
    aad588a6 · lintian overrides, more of google sanitarization, underscore js · 
    nipype Debian release 0.9.2+git593-g35c9f46-1
    Unverified
  • debian/0.9.2+git581-gd9a52d0-1
    3f2e25fa · - switch away from pysupport - updated years, and used BSD-3 for the short license label · 
    nipype Debian release 0.9.2+git581-gd9a52d0-1
    Unverified
  • debian/0.9.2-1
    754fbe73 · changelog · 
    nipype Debian release 0.9.2-1
    Unverified